Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00997 ATGTCAGGTATATTTACGGACACTGAGATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATGAACAGAATGAATTCAAACAAGATTTCAGAGATGAATTTACTGAGGGAGCGTTTATTTCTGAATCTGATCAGTCAGAAGATATCCTTGAAGCCGCTTATGTGGTTGACTCCATGCAAGACATTACAACTTTGAAATTTAGTGAGAATTTTGCGGAGAAAATTGGCAAATACCACTTTTCTACTTTCCAGCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAGGACTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTACTGGCGAGATTTACAAACAAAAGTTGGTATGTCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATAGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTATACCAGAAAATGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGTCAGAGGCGGATATTATGCAAATGATGAACATGCTAAAGTCAGGGATTAGCACCTCACAGATATTTGGTCTTCTAGCTAGTCAAACGGGCGGGTACGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATTTCATGATTCAAGAGAGCTGCTAGAGAGATATGCTGCTAAGTTATACACTCATGTGATATTTCTTTTCTTTCGGCCATTTCTCTCTAGAGCTGGATCAATGCGGGTGCTAAACATAGATAATACCGATGATTGCATAAAGTACATTGTGTGTAAGCATGGGAGGCCCAATTTTATGTGGACCGTTGATTTTCGTCAAGAAGAAATGATCTTCATGTGTACCTGTTTAAGAATGGAGTCATTTGGAATTCCCTGTGAACATATTGTGAAAGTTCTGGTTGACAGAGACATCAGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTTAAATCAACACTCAATGATCCAAGTGGGCTCACCAGGGATGCTGTTGTTATTAGTCGTCAAAGTGCCTTGGTGGAATTTTCTAAACAATTGGCTGTTGTTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGACCTAATTATGGGATTGTACTCATCTTACAAGGCTGCAGATGAAGGCACTAATCAACCTCAGTCAGGTGTAGCTAAAAGTAGCAATCCGTATGTGCATCAAAGCGGAGTAGGCTCAGGACAACTATCTAGGAAGAAGCGGCAACGTTGTAGTGTTTGTCAAATGGAAGGAAATAAGAAGACAACATGTCCCTGGCAAAAGGACATTGACAACAACGTTATTGAAGATGAAGCTAATGGTTCGGATGACGGCGACGTATATCCAGAACTGACGGCTGAGTTAGATAGTGATAATTAG 1620 0.4043 MSGIFTDTEMNEQYQEDDDFNQQEELVSDQDMMDEQNEFKQDFRDEFTEGAFISESDQSEDILEAAYVVDSMQDITTLKFSENFAEKIGKYHFSTFQLAFDFYMKYSKSKDFSARKSKTFKNSTGEIYKQKLVCHRQGFRMEKYYTIEKRKKEPRLETRTGCEARMDVKFIPENGRWHIFYFSDEHNHDLLDTQFSAMLPAHRKMSEADIMQMMNMLKSGISTSQIFGLLASQTGGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKAFHDSRELLERYAAKLYTHVIFLFFRPFLSRAGSMRVLNIDNTDDCIKYIVCKHGRPNFMWTVDFRQEEMIFMCTCLRMESFGIPCEHIVKVLVDRDISEIPRSLVLDRWTKKVKSTLNDPSGLTRDAVVISRQSALVEFSKQLAVVAAKVPERYEETRDLIMGLYSSYKAADEGTNQPQSGVAKSSNPYVHQSGVGSGQLSRKKRQRCSVCQMEGNKKTTCPWQKDIDNNVIEDEANGSDDGDVYPELTAELDSDN 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00997 539 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 293 444 IPR031052 GO:0006355
Adu07g00997 539 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 81 283 IPR031052 GO:0006355
Adu07g00997 539 ProSiteProfiles Zinc finger SWIM-type profile. 341 379 IPR007527 GO:0008270
Adu07g00997 539 MobiDBLite consensus disorder prediction 458 484 - -
Adu07g00997 539 PANTHER OS03G0181600 PROTEIN 293 444 - -
Adu07g00997 539 PANTHER OS03G0181600 PROTEIN 81 283 - -
Adu07g00997 539 SMART 26again6 354 381 IPR006564 GO:0008270
Adu07g00997 539 MobiDBLite consensus disorder prediction 1 23 - -
Adu07g00997 539 MobiDBLite consensus disorder prediction 516 539 - -
Adu07g00997 539 Pfam FAR1 DNA-binding domain 101 191 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00997 Adu-Chr7 13598851 13601204 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu07g00997 FAR1 7.8e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00997 - - adu:107457868 588.956