Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00951 ATGTACACGTATTTCGACAATGATATAGCTGGTGCCGATTTGGAACTGAATTCTATGTCTGACGAGAATGGTTTCTTTGGATTGGGTTTTAAATGCCCCCAACTTGTGTCTTTTTTGTGTGTGAGTTCAAAGGATGGTAGCAGAGAAGATGGTTTGAGTGGTTTAAGCAGCAAAGTCTCGACCACTGCTCCTCCGACACCTCGGTCCGAGGGAGAGATCTTGAAATCCTCGAATTTGAAGAGCTTCACCTTTGCTGAACTTAAAACCGCTACGAGGAACTTTCGTCCGGATAGTGTGGTGGGAGAAGGTGGTTTTGGTTCTGTATTCAAGGGGTGGATTGATGAGCAGACACTTGTACCGGTTAAACCCGGTACTGGAATGGTCATTGCTGTGAAGAGGCATAACCAAGAAGGTGGACAAGGACACAGTGAATGGTTGACCGAGATAAATTACCTGGGGCAGCTGCGTCATCCTAATCTTGTGAAACTGGTTGGTTATTGCTTGGAAGATGATCAAAGGCTTTTGGTGTATGAGTTCTTGACCAAGTGTAGTTTGGATAATCACTTATTTAGGAGGGCTTCTTATGTTGAGCCGCTTCCTTGGAACATTCGGATAAAGGTTGCCGTTGATGCTGCTAAGGGTCTGGAATATCTCCACAGCGACGAAGCAAAAGTGATATTCAGAGACTTCAAAACTTCTAATATATTGCTTGATTCGAATTATAATGCGAAACTTTCTGATTTCGGCTTGGCAAAGGATGGACCAGCAGGTGATAAGAGCCATGTCTCTACAAGGGTGATGGGCACATATGGTTATGCTGCACCTGAATACATGGCCACAGGTCACTTGACCAAGAAGAGTGATGTATACAGCTTCGGAGTCGTTCTCCTAGAAATCATGTCCGGTAAGCGCGCCCTCGACAACAACAGGCCATCCCGGGAGCAGAACTTGATTGAATGGGCCAAACCTTACCTCACCAGCAAGCGCAGGATCTTCCAAGTCATGGATGCTCGAATCGAAGGCCAATACACACTGCGCGAGGTGATGAAACTAGCTAACCTCGCCATCAAATGCCTATCGGTCGAGCCGAGGTTTCGGCCGAAGATGGATGAGGTGGTGAGGACATTGGAGCACCTGCAGGATTCCGACGGAGAGGGATGCTCTAGAGATCAAGATTTGAAAAGGAATGGTCATAGACATAGCTCAGGAAACAGTGGCACTAAACAACATAGAAGAAAACATGAAACAGTTACAAACACCATGCAAAAAGAATGA 1275 0.4604 MYTYFDNDIAGADLELNSMSDENGFFGLGFKCPQLVSFLCVSSKDGSREDGLSGLSSKVSTTAPPTPRSEGEILKSSNLKSFTFAELKTATRNFRPDSVVGEGGFGSVFKGWIDEQTLVPVKPGTGMVIAVKRHNQEGGQGHSEWLTEINYLGQLRHPNLVKLVGYCLEDDQRLLVYEFLTKCSLDNHLFRRASYVEPLPWNIRIKVAVDAAKGLEYLHSDEAKVIFRDFKTSNILLDSNYNAKLSDFGLAKDGPAGDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRALDNNRPSREQNLIEWAKPYLTSKRRIFQVMDARIEGQYTLREVMKLANLAIKCLSVEPRFRPKMDEVVRTLEHLQDSDGEGCSRDQDLKRNGHRHSSGNSGTKQHRRKHETVTNTMQKE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00951 424 MobiDBLite consensus disorder prediction 48 72 - -
Adu07g00951 424 ProSitePatterns Protein kinases ATP-binding region signature. 100 132 IPR017441 GO:0005524
Adu07g00951 424 MobiDBLite consensus disorder prediction 408 424 - -
Adu07g00951 424 Gene3D Phosphorylase Kinase; domain 1 69 179 - -
Adu07g00951 424 Pfam Protein tyrosine and serine/threonine kinase 98 376 IPR001245 GO:0004672|GO:0006468
Adu07g00951 424 PANTHER OS01G0588500 PROTEIN-RELATED 48 415 - -
Adu07g00951 424 CDD STKc_IRAK 100 379 - -
Adu07g00951 424 ProSiteProfiles Protein kinase domain profile. 94 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00951 424 PANTHER KINASE 1B 48 415 - -
Adu07g00951 424 SUPERFAMILY Protein kinase-like (PK-like) 66 376 IPR011009 -
Adu07g00951 424 MobiDBLite consensus disorder prediction 379 424 - -
Adu07g00951 424 MobiDBLite consensus disorder prediction 49 72 - -
Adu07g00951 424 MobiDBLite consensus disorder prediction 379 399 - -
Adu07g00951 424 Gene3D Transferase(Phosphotransferase) domain 1 181 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00951 Adu-Chr7 12922218 12934374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00951 72 379 Glycoside Hydrolase AT3G07070 49.355 3.32e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu07g00951 PK_Tyr_Ser-Thr 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00951 - - gmx:100775335 630.557