Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00920 ATGAGTTTTGTATTCCGGGGAACAAGAGCTGACATAGAAAATGGATTTCCAGGATTTATGCCTGAGCGACGTGCATTGCGTGTTCATCCAGCACGTCCTAGTAATTCCAATTCACTCACTTTCCTCGTCACAGTTCTCTTGTTGTTCATGATACTTAACTCGCACCAGATGTCACCAAATTTTCTGCTCTGGTTGGTGCTTGGTGTTTTCTTAATGGCTACAATGTTGAGGATGTATGCAACATGTCAACAGCTTCAAGCACAGGCTCAAGCTCATGCAGCAGCAGCTAGTGGGCTTTTAGGCCACACTGAGCTGCGGTTGCATATGCCGCCATCAATTGCCCTTGCCACCAGAGGACGCCTACAAGGCCTCAGACTTCAACTTGCACTTCTTGATCGGGAGTTTGATGAGCTAGATTATGAAACACTAAGGGCTCTTGATTCTGATAATGTTCCTACTGCACCTTCCATGACCGAGGAAGAGATAAATGCACTTCCTGTACACAAATACAAGGTTTCTGGTCCACAAAATGGCACTGGTTCCTCAATGCAACAGGGGTCTTCTTCCACTCCTGCGGAGAAGAAGCAAGACAATTCAAATGTAGCTGGAAGCATGAAAGCCTCTGATGATGAGCTGACTTGCAGTGTATGTTTGGAGCAAGTTAACATTGGGGATGTACTTCGTAGCTTGCCCTGCTTGCATCAGTTTCATGCGAATTGCATTGATCCCTGGCTGCGACAACAAGGAACATGCCCCGTCTGCAAATTCAGAGCAGGATCTGGGTGGAATGAAAGTGGAGCTAATGATATTGCAGATATGGTTTGA 825 0.4618 MSFVFRGTRADIENGFPGFMPERRALRVHPARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDELDYETLRALDSDNVPTAPSMTEEEINALPVHKYKVSGPQNGTGSSMQQGSSSTPAEKKQDNSNVAGSMKASDDELTCSVCLEQVNIGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSGWNESGANDIADMV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00920 274 ProSiteProfiles Zinc finger RING-type profile. 214 255 IPR001841 -
Adu07g00920 274 PANTHER TARGET OF ERK KINASE MPK-1 1 268 - -
Adu07g00920 274 SMART ring_2 214 254 IPR001841 -
Adu07g00920 274 Pfam Ring finger domain 213 255 IPR001841 -
Adu07g00920 274 MobiDBLite consensus disorder prediction 174 205 - -
Adu07g00920 274 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SDIR1 1 268 - -
Adu07g00920 274 CDD RING-H2_PA-TM-RING 213 255 - -
Adu07g00920 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 259 IPR013083 -
Adu07g00920 274 SUPERFAMILY RING/U-box 209 258 - -
Adu07g00920 274 MobiDBLite consensus disorder prediction 170 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00920 Adu-Chr7 12284786 12287700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00920 1 274 C3H Transcription Factor Family AT3G55530 77.256 1.30e-144 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00920 K16283 - gmx:100777936 454.521