Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00918 ATGTCTTCGCATTGGTGTTACAGGTGCAATAAATTTGTGAGGGTATGGAGGCAGGACATTGTGATTTGTCCAGATTGCGATAGCGGTTTTGTCGAAGAGGTAGATCCTAACACACGCACCGTTTACGCCGATGGCAACCGCGGTCGACGGTTGCCGGCGGCAGCGATGTACATGATAGGCCACCATCAACGTCACCAGCGTCATAATTCCGTTGAAAATAACGCCGTCGCCACCACCACAAACGATAATAGCAATAATAATGACAACAACAATGTTAGCTTGTCGCGGCAAAATCAACGGCGACACTGCCGGAACACCAATGGCGGTGGCGGAGGAACAGGCGGTGACAGGTCGCCGATCAATCCGGTCATCATGCTCCGCGGCGGCGAGCAATCCGAGGGAACCAGCAGACGCAGGGGGTTCGAGCTTTTCTATGACGACGGCGCCGGTGCCGGTCTCCGTCCCTTGCCACCGAGCATGTCGGAGTTTCTCCTTGGAACAGGCTTCGATAGGGTTTTGGAGCAGTTCTCACATTTCGAAAGGCACGAGCGACACCTTCACCACCACAACCAGCAGCCTCCTCCGGCGTCAAAATCCGCCGTAGAAGGCTTGCCGGAGGTGGAGATCACCGAGAACAACCTCGCCACAGAGCCACATTGCGCAGTTTGCAAGGAAGCCTTCGAGATCGGAACAAAAGCTAAAGAAATGCCGTGCAAGCACATATACCACTCGGACTGCATCTTGCCGTGGCTCGCCCTTCGAAACTCCTGCCCGGTTTGCCGCCACGAGTTGCCCACAGAACAAAACAATAACGGTCACGTGCAGAATGCGGCCACCAACAACAGCGCACGTGCCGATCAAGAAGATAACAATAACAATGATAACGGCAATAATAACAATGTGGGGCTAACAATATGGCGGTTACCGGGTGGCGGTTTTGCGGTTGGGAGGTTAACCGGTGCAGGAAGAGGGGGATCAGAGAGGGAAAATCTTCTTCCTGCTGTGTACACAGAAATGGATGGAGGAGGGTTTGATAGTAATAACAACAATAATAATAATGGTGGCGGTGGTGGTGGTGGTGGTGAGAGGAGGAGGGTTTCTTGGGCGGTTTCAACTACTTCAAGAGAGAGAGAAAGTGGTGGTGGGTTGAGGAGAATGATGAATAGTTTCTTTGGTTGCTTCAGACGTGGGAATCATGGTGCTCTTCATCATCATCATTCTTTTCCTTCTTCTTCTTCTCGGAATGGTGATTATCCTAGGCAGTATTCATCATCATCACCTTCAAATAGAAATAGAACTATGACAAATAATGGCACGGCACCTTCCGCTGTCAATTTCGATTTGGATCACTCCCCTTTGCGTCAACGCAGGACTTGGTCTATGGATGTAAATAGTGGTGGTTCTAGAGCTTGGTGA 1416 0.5099 MSSHWCYRCNKFVRVWRQDIVICPDCDSGFVEEVDPNTRTVYADGNRGRRLPAAAMYMIGHHQRHQRHNSVENNAVATTTNDNSNNNDNNNVSLSRQNQRRHCRNTNGGGGGTGGDRSPINPVIMLRGGEQSEGTSRRRGFELFYDDGAGAGLRPLPPSMSEFLLGTGFDRVLEQFSHFERHERHLHHHNQQPPPASKSAVEGLPEVEITENNLATEPHCAVCKEAFEIGTKAKEMPCKHIYHSDCILPWLALRNSCPVCRHELPTEQNNNGHVQNAATNNSARADQEDNNNNDNGNNNNVGLTIWRLPGGGFAVGRLTGAGRGGSERENLLPAVYTEMDGGGFDSNNNNNNNGGGGGGGGERRRVSWAVSTTSRERESGGGLRRMMNSFFGCFRRGNHGALHHHHSFPSSSSRNGDYPRQYSSSSPSNRNRTMTNNGTAPSAVNFDLDHSPLRQRRTWSMDVNSGGSRAW 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00918 471 MobiDBLite consensus disorder prediction 77 106 - -
Adu07g00918 471 MobiDBLite consensus disorder prediction 342 356 - -
Adu07g00918 471 SMART ring_2 220 260 IPR001841 -
Adu07g00918 471 SUPERFAMILY RING/U-box 201 268 - -
Adu07g00918 471 Pfam Ring finger domain 219 261 IPR001841 -
Adu07g00918 471 MobiDBLite consensus disorder prediction 183 202 - -
Adu07g00918 471 MobiDBLite consensus disorder prediction 77 121 - -
Adu07g00918 471 MobiDBLite consensus disorder prediction 337 382 - -
Adu07g00918 471 CDD RING-H2_RNF126_like 220 261 - -
Adu07g00918 471 MobiDBLite consensus disorder prediction 405 444 - -
Adu07g00918 471 MobiDBLite consensus disorder prediction 282 302 - -
Adu07g00918 471 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 180 268 IPR013083 -
Adu07g00918 471 MobiDBLite consensus disorder prediction 403 451 - -
Adu07g00918 471 ProSiteProfiles Zinc finger RING-type profile. 220 261 IPR001841 -
Adu07g00918 471 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE PROTEIN 2 389 - -
Adu07g00918 471 Pfam Protein of unknown function (DUF1117) 301 417 IPR010543 -
Adu07g00918 471 Pfam zinc-ribbon 3 33 IPR039525 GO:0061630
Adu07g00918 471 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 2 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00918 Adu-Chr7 12244545 12247188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00918 194 267 C3H Transcription Factor Family AT5G15820 57.333 1.36e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00918 - K11982 gmx:100784364 384.415