Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu07g00908 | ATGGAGGAGGAATATGATAATAATAAGTGGTTGATGTGGATGAAGAGAAAACATAGTAGTTACTCATACTTATCATGGGAAGAGAGGGCTTTTGCAGAAGATGCAGCAAGAGTTCTTGGTGGAAGCACATGGCCGCCAAGATCATACACTTGCAATTTTTGCCATAGACACTTCACCTCTGCTCAAGCACTTGGTGGTCACATGAATGTTCACCGAAGAGATAGGGCTAGACTCAAACAATCATCATCATCATCATTAGGAGAAGATAACCAACAACATGCTATAACAGGCTCTTACTCTTCTTCAATTAAAAGGGGGCAACAGAAGAATAATTTTGAAGAAGATGAAGACACCATGATCAGTAGTTGTAAGAAGTTAAGGACTACTACCACCATTTTCTGCCTCAAGCCATGTTCAAACGATAATGGAATTGAAGACTTGGATCTTGAACTCAGGCTAGGCGCCAAACAACAAAAAGTTAACTAA | 486 | 0.3992 | MEEEYDNNKWLMWMKRKHSSYSYLSWEERAFAEDAARVLGGSTWPPRSYTCNFCHRHFTSAQALGGHMNVHRRDRARLKQSSSSSLGEDNQQHAITGSYSSSIKRGQQKNNFEEDEDTMISSCKKLRTTTTIFCLKPCSNDNGIEDLDLELRLGAKQQKVN | 161 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu07g00908 | 161 | SUPERFAMILY | beta-beta-alpha zinc fingers | 46 | 75 | IPR036236 | - | |
Adu07g00908 | 161 | PANTHER | OS07G0101800 PROTEIN | 9 | 107 | - | - | |
Adu07g00908 | 161 | SMART | c2h2final6 | 49 | 71 | IPR013087 | - | |
Adu07g00908 | 161 | MobiDBLite | consensus disorder prediction | 80 | 107 | - | - | |
Adu07g00908 | 161 | Pfam | C2H2-type zinc finger | 49 | 73 | - | - | |
Adu07g00908 | 161 | Gene3D | Classic Zinc Finger | 45 | 128 | - | - | |
Adu07g00908 | 161 | MobiDBLite | consensus disorder prediction | 76 | 117 | - | - | |
Adu07g00908 | 161 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 49 | 76 | IPR013087 | - | |
Adu07g00908 | 161 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 9 | 107 | - | - | |
Adu07g00908 | 161 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 51 | 71 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu07g00908 | Adu-Chr7 | 11874997 | 11876096 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu07g00908 | 12 | 81 | C2H2 Transcription Factor Family | AT2G37740 | 68.571 | 1.04e-26 | 100 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Adu07g00908 | zf-C2H2_6 | 1.2e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu07g00908 | - | - | aip:107608478 | 301.212 |