Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00890 ATGGAAGAAAATTTTGAGTCCTCTCATGTACCACAACAAAGCAGAAGGAACAAGCTCAGAGAAATGGTCCAAACCCAAAAACAACAACCACCACCACAACCATTTCCTCCTTCATTTCAAACCAGCATAACTCAACCCTTTGAGACAAATCCAATTTCATCTACATTTATTAGCACCAAACCACCCTATCATTACTCCTTTCTAGCAAAGAGCTCTTCACAACTAGAACATTACCCTGCAAGCTTTCACAATCTTCTTCTTCCACCCTATTTGGTGGATCAAAATCATCATGTGCCCCAAGAACCATGCAGTGATGTTAGAAACATTGGTCCTGTGGTTGTTCCTTTTACAGGGTATGCTTCCATATTGAAGAGATCAAGGTTTCTGAAGCCAGCTCAGCAGATTCTTGAAGACATGTGTGGCAGTGTTTTGAATCCTCCACCAAGATTGAATGAAAGTGGTGATGATCATGAAGAAGATCCCATCATTGGAACTAATGGTAGGGATGGAGTTCAGCATCATTGTAGGGATTCTGTACTTGGTTGCATGTTAGATGAGGTATACAAGAAGTATATACTATACTGCCAACAAATGCAATCAGTGGTGTCATCATTTCAGAAAGTAGCTGGGCTTGGAAATGCCACTCCTTACATATCCTTTGGAATCAAATCCATTTCCAAGCATTTTGGATGTTTGAAACATGCTATCTATGATCAGCTTCAGTTCACAATGAAGAACACTACTCCTGCATCTAACAATGTTGTTGAAAAGGGTCTTCAATCAGTGCAACGCTTACACTCAGTTCAACCTGTCTTGAGATCCCAAAGAGGGCTTCCGGATCATGCTGTAGCTTTGTTGAGGAGATGGCTCTTTGAACACTTCTTACACCCGTATCCTACTGATTCTGAAAAGGATACATTGGTTCAACAGACTGGCCTTTCAAGATGTCAGGTTTCAAATTGGTTCATCAATGCAAGAGTAAGAATCTGGAAGCCCATGGTGGAAGAGATGCACATGAATGGGGAACAGAAGGCTCAAGAATCAGAAGTGATCCATCACGCAAGGAAGCCCATTATTGGCCCTTAA 1086 0.4153 MEENFESSHVPQQSRRNKLREMVQTQKQQPPPQPFPPSFQTSITQPFETNPISSTFISTKPPYHYSFLAKSSSQLEHYPASFHNLLLPPYLVDQNHHVPQEPCSDVRNIGPVVVPFTGYASILKRSRFLKPAQQILEDMCGSVLNPPPRLNESGDDHEEDPIIGTNGRDGVQHHCRDSVLGCMLDEVYKKYILYCQQMQSVVSSFQKVAGLGNATPYISFGIKSISKHFGCLKHAIYDQLQFTMKNTTPASNNVVEKGLQSVQRLHSVQPVLRSQRGLPDHAVALLRRWLFEHFLHPYPTDSEKDTLVQQTGLSRCQVSNWFINARVRIWKPMVEEMHMNGEQKAQESEVIHHARKPIIGP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00890 361 SMART HOX_1 272 336 IPR001356 GO:0003677
Adu07g00890 361 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 108 348 - -
Adu07g00890 361 SUPERFAMILY Homeodomain-like 276 339 IPR009057 -
Adu07g00890 361 Gene3D - 275 352 - -
Adu07g00890 361 ProSiteProfiles 'Homeobox' domain profile. 269 332 IPR001356 GO:0003677
Adu07g00890 361 SMART prehox3 117 238 IPR006563 -
Adu07g00890 361 Pfam Associated with HOX 122 236 IPR006563 -
Adu07g00890 361 MobiDBLite consensus disorder prediction 1 44 - -
Adu07g00890 361 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 9 108 348 - -
Adu07g00890 361 CDD homeodomain 273 333 IPR001356 GO:0003677
Adu07g00890 361 Pfam Homeobox KN domain 289 328 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00890 Adu-Chr7 11553945 11557199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00890 107 339 Homeobox Transcription Factor Family AT5G02030 48.092 1.23e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Adu07g00890 POX 2.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00890 - - adu:107457744 726.087