Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00876 ATGACCGAAGAAGAAGACCGAGCATCCGTTGAACCAATCGCCGGCAATGGCGTCTCTCTTCCGCAAGAGCTCGTTGGAGGAGGAGGTACGGCCGAGACGGAGCCAGCGGGACGCGATGCGGAGGTGACTGTAGTTGGTGACGGCAATAGTGGTGGTGGTGCTGCCGCGGGAAAAGTAAAGGGACCGTGGTCTCCGGAAGAGGATGCGGTACTGAGCCGATTGGTGGCGCAGTTCGGAGCGAGGAATTGGAGCATGATCGCGCGGGGAGTTCCAGGCAGGTCAGGGAAGTCATGCCGGCTCCGATGGTGTAACCAGCTGGATCCTTGTGTTAAACGCAAGCCTTTCACTGAGGAAGAAGATTGCATTATCGTATCAGCCCATGCAATCCATGGAAACAAGTGGGCAGCTATTGCAAGGCTTCTTCCAGGTAGAACAGATAATGCAATCAAGAACCACTGGAACTCTACCCTAAAGCGCAGGTGTATGGAACAGGGAAGATATGTCCCTCCACGTGTTGAAGCGATGGAAGATGGTAGCATTGAGAAAACAAAGGCATCCTCTGAAGAAACCCTGTCAGTTGAGGATATGAATTCATATCCTACACAAGTTAGAAATGTCGTTATGAATACTGAGATTAAACAGCACGAAGATAAACCTCCAACTACAAGAAATGATGTTTCCGAAGTGGAGCAAAATCCTACCCTTCATCGACCAGTAGCACGTACTAGTGCATTCAGTGTTTATAATCCTACAAGCAGGCCTACAAATGGATCATCAAGTTCAAAGATCCTGCCATTGCAAAGCCCTTTATTCCAACTACCCAAAGCAGTTGAAGGAGCCTGCAAATTATTTGATGGTATTGAATGTGAACCAATGGTTCCATTGCAATGTGGTCATGGATGCTGTGCACCAGAATCAGGGGGAAGCCATTCTCATGGTTCTTCGCTATTAGGTCCCGAGTTTGTTGACTATTTGGATTCTCCCCCTTTCTTAAGTCATGAACTGATTTCCATAGCTACAGACCTAAATAACATGGCATGGATCAAGAGTGGCCTTGAGAACCATGGAGGTGCCAAAGTAACCGATAATGCCGCAAACTTGACAGGATCACAGGGGGCTGCTACTGTTTCACAAACGGGCTTCTTAGGCCAAGGCCAAAAGAATGACTTCATGCAAATGCAATATGAGGAAGGACCAGGAAAGGTCATGTTTCTGGGTACAAATACAATGAAAGAAATGTTATCATCGAAGATGCCTCGGCAACATTTCGCAATGCCTGCAGAAGTTTGA 1290 0.4775 MTEEEDRASVEPIAGNGVSLPQELVGGGGTAETEPAGRDAEVTVVGDGNSGGGAAAGKVKGPWSPEEDAVLSRLVAQFGARNWSMIARGVPGRSGKSCRLRWCNQLDPCVKRKPFTEEEDCIIVSAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCMEQGRYVPPRVEAMEDGSIEKTKASSEETLSVEDMNSYPTQVRNVVMNTEIKQHEDKPPTTRNDVSEVEQNPTLHRPVARTSAFSVYNPTSRPTNGSSSSKILPLQSPLFQLPKAVEGACKLFDGIECEPMVPLQCGHGCCAPESGGSHSHGSSLLGPEFVDYLDSPPFLSHELISIATDLNNMAWIKSGLENHGGAKVTDNAANLTGSQGAATVSQTGFLGQGQKNDFMQMQYEEGPGKVMFLGTNTMKEMLSSKMPRQHFAMPAEV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00876 429 PANTHER MYB PROTEIN-RELATED 40 355 - -
Adu07g00876 429 SUPERFAMILY Homeodomain-like 57 153 IPR009057 -
Adu07g00876 429 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 161 IPR017930 -
Adu07g00876 429 CDD SANT 62 104 IPR001005 -
Adu07g00876 429 SMART sant 111 159 IPR001005 -
Adu07g00876 429 SMART sant 59 108 IPR001005 -
Adu07g00876 429 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 106 IPR017930 -
Adu07g00876 429 MobiDBLite consensus disorder prediction 1 63 - -
Adu07g00876 429 ProSiteProfiles Myb-like domain profile. 55 106 IPR001005 -
Adu07g00876 429 CDD SANT 114 157 IPR001005 -
Adu07g00876 429 ProSiteProfiles Myb-like domain profile. 107 157 IPR001005 -
Adu07g00876 429 Pfam Myb-like DNA-binding domain 112 156 IPR001005 -
Adu07g00876 429 Pfam Myb-like DNA-binding domain 60 106 IPR001005 -
Adu07g00876 429 Gene3D - 113 189 - -
Adu07g00876 429 PANTHER MYB TRANSCRIPTION FACTOR-LIKE PROTEIN 40 355 - -
Adu07g00876 429 Gene3D - 59 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00876 Adu-Chr7 11319495 11323325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00876 25 391 MYB Transcription Factor Family AT3G55730 45.361 1.34e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu07g00876 Myb_DNA-binding 3.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00876 K09422 - gmx:100781228 517.309