Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00861 ATGGAATTGGAAAGCGTGTGTCCTGGCTGGAATTGGAACTGGAATTTAGAGCTGGAAGAAGATGTCAATGATATAGAAGCCGGCCGGGTCCCTGTCCCCGGCTATATCGCCTCTTCTTTCACCTTCGAGCTTCTTCACCACCACAACCATGATGGATCTCGAAGAAGGCCTAATACCCCAAGACCTTCTTCTGATCAAGAAAGGAAGAAAGGTGTTCCTTGGACTCAGGAGGAGCACAGACGTTTTCTGATGGGGCTTTTGAAGTATGGAAAAGGAGATTGGAGAAACATTTCGCGGAATTTCGTGGTGACCAAGACTCCTACTCAAGTTGCTAGCCATGCTCAGAAGTACTACATAAGGCAAAAGGTTTCTTCAGGAGGGAAAGATAAGAGGAGACCGAGCATCCATGATATAACAACTCTTAACCTCGCAGAAGCCACTGCAACTTTAGATGATAATAATAATAATATCAACAAGCCCCTCTCATTCAATGAGTCTAAAGTGCAATTGGATTGGTTCAATCACTGTAATGATGATGGATCAGTGATGGTTTTCGACCCCAATTGCGACCATTTGCAAGAGCAGGATCTCTTTGATTGTGCTTTCCATGAAGCTTATGCAAAGCTCAAGATCCCGCATTTCAACAAGGAAGCTGATTTTGGTATTCATGCATTGTAA 678 0.4395 MELESVCPGWNWNWNLELEEDVNDIEAGRVPVPGYIASSFTFELLHHHNHDGSRRRPNTPRPSSDQERKKGVPWTQEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKVSSGGKDKRRPSIHDITTLNLAEATATLDDNNNNINKPLSFNESKVQLDWFNHCNDDGSVMVFDPNCDHLQEQDLFDCAFHEAYAKLKIPHFNKEADFGIHAL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00861 225 Gene3D - 72 123 - -
Adu07g00861 225 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 17 204 - -
Adu07g00861 225 ProSiteProfiles Myb-like domain profile. 66 118 IPR001005 -
Adu07g00861 225 MobiDBLite consensus disorder prediction 48 74 - -
Adu07g00861 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 122 IPR017930 -
Adu07g00861 225 ProSiteProfiles SANT domain profile. 74 122 IPR017884 -
Adu07g00861 225 Pfam Myb-like DNA-binding domain 73 117 IPR001005 -
Adu07g00861 225 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 69 121 IPR006447 GO:0003677
Adu07g00861 225 SUPERFAMILY Homeodomain-like 67 122 IPR009057 -
Adu07g00861 225 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 17 204 IPR043363 -
Adu07g00861 225 CDD SANT 73 117 IPR001005 -
Adu07g00861 225 SMART sant 70 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00861 Adu-Chr7 11132197 11133192 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu07g00861 Myb_DNA-binding 1.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00861 - - ccaj:109813886 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00861 07 11132197 11133192 Adu07g00861 07 11132197 11133192 ECH