Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00852 ATGGATGTGATAAAGACGCAGCAAATATCGTGGAGGGCGATAGAGAAAGTTGTGGTGCACCCACTTGTGCTCCTCAGCATAGTCGACAACTACAACAGAGTCGCCAAGGACACGCGCAAGCGCGTCGTCGGCGTCCTCCTCGGCTCTTCCTTCAAGGGCACCGTCGACGTCACCAACAGCTATGCCGTTCCCTTTGAAGAAGATGACAAGGATCCTTCCATATGGTTTCTTGACCATAACTACCACGAGTCCATGTTCTCCATGTTTAAGAGAATTAACGCAAAGGAGCATGTTGTTGGGTGGTACAGCTCCGGCCCCAAGCTCCGAGAGAATGATCTTGACATTCATGCTTTGTTCAATGACTATGTTCCCAATCCTGTTTTGGTTATAATTGATGTTGAGCCTAAGGAACTGGGAATTCCTACCAAAGCTTACTATGCAGTTGAAGAGGTTAAAGAGAATGCCACTCAGAAAAGCCAAAAGGTCTTTGTGCATGTGCCATCAGAAATTGCTGCTCATGAAGTTGAGGAAATAGGTATGCCATCAAATCCAAAATTGCTGCATCTTCTTGGAAAACTTACAGCCTTGAAAGGTTTGGATGCAAGACTTAAAGAGATAAGAAGTTATCTTGACCTTGTCATCGATGGAAAGCTTCCTTTAAACCATGAGATTTTGTACCATCTGCAGGATGTTTTCAACTTGCTACCAAACCTTAATGTCAACGATCTGATAAAGGCCTTTGCAGTGAAAACAAATGATATGATGCTGGTAATATACCTGTCGTCCCTTATCAGAAGTGTAATTGCGCTCCACAACTTGATTAACAATAAGATGCTTAACAAAGAACATGAACGCGCAGAAGACTCAAAGTCAGTACCAGTATCAAGTACAGCTGGAAGTTAA 903 0.4352 MDVIKTQQISWRAIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSSGPKLRENDLDIHALFNDYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGMPSNPKLLHLLGKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVNDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSKSVPVSSTAGS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00852 300 CDD MPN_RPN7_8 15 285 IPR033858 GO:0005838
Adu07g00852 300 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 1 300 - -
Adu07g00852 300 ProSiteProfiles MPN domain profile. 17 154 IPR037518 -
Adu07g00852 300 Gene3D Cytidine Deaminase, domain 2 10 185 - -
Adu07g00852 300 SMART pad1_6 16 150 IPR000555 GO:0005515|GO:0008233|GO:0008237
Adu07g00852 300 Pfam Maintenance of mitochondrial structure and function 187 275 IPR024969 -
Adu07g00852 300 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 13 124 IPR000555 GO:0005515|GO:0008233|GO:0008237
Adu07g00852 300 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00852 Adu-Chr7 10853177 10855790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00852 19 238 Eukaryotic Initiation Factors Gene Family AT2G39990 29.565 2.97e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00852 K03038 - gmx:100790393 535.798