Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00835 ATGATCATCTTCATTATGTTTCTCTTACCTATTGCTTCACAAATAGAGTACATGACATCTGCTGCAGTGACCATGCCCTTGAGTTCAGAGACCGATCAGACGGCTTTGCTTGCTTTGAAGGACAAGCTTACCAATGGAGACTCGGATGCTCTTCCATCATGGAATAAGTCACTCCATTTTTGTGAATGGGAGGGGGTAATATGCAGTCGCCGCCACAAGAGAGTCACATCCTTGCAACTACAAAATCAATATTTGGGTGGCACTCTTGCACCTTCCTTGGGAAATCTAACATTCCTCAGAGAGATGAGTCTTACTAGCATCAATTTACATGGTCAGATTCCAAGAGAAGTTGGTCATTTGAAGAGACTGCAGATTCTTGACTTGAGGCAAAATAATCTTCATGGAGAGATTCCCATAGAGATGATAAATTGTTCAAGCCTTCAAGTAATTATATTGCTATACAATAATCTAACTGGCGAAGTTCCTTCATGGTTTGGTTCTATGATGCAACTGACTCAGCTGGGGCTTGGTGCTAACGGGTTTGCTGGTAGTATACCACCTTCATTGGGAAATCTCTCATCTCTTGAGAAGTTGTCACTTGCATACAATCAATTGGAAGGAAGCATAACTCCAACTTTGGGTAGGTTGTCAACTTTGAAATTTTTGGGTTTGGGTGTAAATAATTTTTCTGGTCAAGTTCCTCCTTCACTTTATAACCTTTCAAATATTCAAGTTCTTGATTTCACGGAAAACCAGTTAGTGGGTAATTTTCTCTCAAATTTACCTATGGCTTTTCCCAATCTTGAGATACTTTTGTGTGGAGGGAACCGATTCACCGGTACTTTTCCGTCTTCAATATCCAACCTTTCTGAGCTGCAACAGTTTCAAATATCCAAAAATGATTTTTATGGACCAATTTCTCCTACCGTAGGAAGTTTACACAAACTCCAGATATTTAATGTTGGACGGAATAGATTCGGAAATGGAAGAGCTCATGATTTGGATTTTCTTTCCTCATTGACTAATTGCACTCAATTGCAGAAATTAGGCTTTTATGAAAATTATTTAGGTGGAGTATTGCCAGATATCATAGGCAACTTATCAACCAATCTCGTTTTGCTTGGTATGGCTTTGAATCAAATATCTGGAAGGATACCAGAAGGAATTGGAAAACTAGTCAACCTAGCAACACTTGATATGGAGGGGAATTTTCTTGAGGGAACAATCCCAGATTCAATAGGAAAGCTAAAAAATCTTGGAGTGTTGTGGTTGGATGGAAATAAGTTCTATGGCAACATCCCTCTTGTCATTGGTAACCTTACTATGCTGTCTGACGTTGATCTGAGCTCAAATAAATTTGAAGGACTCATTCCCTTTACACTTGGATACTGCACCAACATGCAAAAATTTGCTGCATATGGAAACAACTTAAGTGGTAATATACCCAATCAAACATTTGGCAACCAGCAAGGCTTAATACAGTTGTTTCTATACTCCAACTCTTTTACCGGCCCCATTCCTTCTGATCTTGGAAACTTGAACCATCTTTCCATCTTGCATTTACAAGATAACAAGCTCATTGGTGAGATTCCCACGAGACTTAGTGCTTGCTCTGCTTTAACAGAGCTCGTACTAGAAAGAAACTCATTCCATGGAAGTATACCTTCATTCTTGGGATCTCTACTATCCCTTGAAATCTTGGACCTTTCTAATAACAACTTCTCAAGCACAATCCCACATGAACTTGTGAATCTCACGTTTCTGAATACTTTGAACTTATCTTTTAACCATCTCTCTGGTGAGGTCCCGGTAGGAGGGGCATTCAATAATGTCACAGCAATATCACTTGCCGGAAACAAAGATCTTTGTGGTGGGATACCTCAATTGAATCTCCCTGCATGCTCTACGTTGCCCTTACAGAAGAAACACAAGAGATCTGTTAAAAAGAAAGTCATCCTCATAATCGCATTTGGAGGGGTTCTAATATCTGTTGTTGCTTTTATTATTAGTATATATCTTCTCAAGAAGAAGCGAAAAAGGTTATCTACTCCTTCTCTAGCTTTGCAATATGGCTATGTGAAGGTATCTTATGGAGAGCTACATCAAGCGACCAATGGATTTTCTTCTTTAAATTTAATTGGCACAGGAAGCTCTGGCTCAGTATATAGAGGAACCCTTGTCCATTTTGAGAGACCTGTTGCTGTGAAGGTGTTGAATCTTCAAACACGCGGAGCATCGAAGAGTTTCATGTCCGAATGCAAAGCTCTAGGAAAAATGAAGCACAGAAACCTTCTCAATATATTGACCTGTTGTTCAGGTGTTGATTACAAAGGTGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTTTAGAAAGCTTGTTGCACAACAACATTGAAGATAGCGAGTCCACAAATCGGAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTCAGAGGAAGCTGTAGTTCACTGTGATGTTAAGCCAAGTAATGTTCTACTTGATGATGACATTGTTGCTCACTTGGGAGACTTTGGGTTAGCTAGGCTTCTTCATGGGCATGCCACAAGCTATACTAGTAGTAATCAAGCTAGTTCCTCTGTTATTAAGGGAACCATCGGATACCTTCCACCAGAGTATGGAGCAGGTGGATCAGTATCACCACAGGGAGACATCTATAGCTATGGAATTCTTCTTTTAGAAATACTAACCGGAAAGAGACCAACTGATGGCATGTTTGGTGAAGATCTAAGCCTACACAAATTCTGTAAACTGGCAATTCCAGAAGGAATTACTGAGATTGTTGATTCAAGATTGATAACTCTGTTTGATGAAGGAGAAAGAGGGATCACACAACAGAAAAACATGATGGAGTGTTTAGTGTCTTTTGCTAGGATTGGAGTTGCATGTTCTGAAGAGTTTCCCACTCAACGGATGAACATTAAAGATGTCATAATGGAGCTGCATGCAATTAAACACAAACTGCTTCCTTAG 3045 0.3964 MIIFIMFLLPIASQIEYMTSAAVTMPLSSETDQTALLALKDKLTNGDSDALPSWNKSLHFCEWEGVICSRRHKRVTSLQLQNQYLGGTLAPSLGNLTFLREMSLTSINLHGQIPREVGHLKRLQILDLRQNNLHGEIPIEMINCSSLQVIILLYNNLTGEVPSWFGSMMQLTQLGLGANGFAGSIPPSLGNLSSLEKLSLAYNQLEGSITPTLGRLSTLKFLGLGVNNFSGQVPPSLYNLSNIQVLDFTENQLVGNFLSNLPMAFPNLEILLCGGNRFTGTFPSSISNLSELQQFQISKNDFYGPISPTVGSLHKLQIFNVGRNRFGNGRAHDLDFLSSLTNCTQLQKLGFYENYLGGVLPDIIGNLSTNLVLLGMALNQISGRIPEGIGKLVNLATLDMEGNFLEGTIPDSIGKLKNLGVLWLDGNKFYGNIPLVIGNLTMLSDVDLSSNKFEGLIPFTLGYCTNMQKFAAYGNNLSGNIPNQTFGNQQGLIQLFLYSNSFTGPIPSDLGNLNHLSILHLQDNKLIGEIPTRLSACSALTELVLERNSFHGSIPSFLGSLLSLEILDLSNNNFSSTIPHELVNLTFLNTLNLSFNHLSGEVPVGGAFNNVTAISLAGNKDLCGGIPQLNLPACSTLPLQKKHKRSVKKKVILIIAFGGVLISVVAFIISIYLLKKKRKRLSTPSLALQYGYVKVSYGELHQATNGFSSLNLIGTGSSGSVYRGTLVHFERPVAVKVLNLQTRGASKSFMSECKALGKMKHRNLLNILTCCSGVDYKGDDFKAIVFEFMPNGSLESLLHNNIEDSESTNRSLNLMQRVNIALDVAFALDYLHNDSEEAVVHCDVKPSNVLLDDDIVAHLGDFGLARLLHGHATSYTSSNQASSSVIKGTIGYLPPEYGAGGSVSPQGDIYSYGILLLEILTGKRPTDGMFGEDLSLHKFCKLAIPEGITEIVDSRLITLFDEGERGITQQKNMMECLVSFARIGVACSEEFPTQRMNIKDVIMELHAIKHKLLP 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00835 1014 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Adu07g00835 1014 ProSitePatterns Protein kinases ATP-binding region signature. 713 736 IPR017441 GO:0005524
Adu07g00835 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 26 1012 - -
Adu07g00835 1014 SUPERFAMILY L domain-like 29 326 - -
Adu07g00835 1014 Gene3D Ribonuclease Inhibitor 31 145 IPR032675 -
Adu07g00835 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Adu07g00835 1014 PANTHER LRR RECEPTOR-LIKE KINASE 26 1012 - -
Adu07g00835 1014 Pfam Protein kinase domain 709 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00835 1014 Gene3D Phosphorylase Kinase; domain 1 668 788 - -
Adu07g00835 1014 ProSiteProfiles Leucine-rich repeat profile. 563 586 IPR001611 GO:0005515
Adu07g00835 1014 SUPERFAMILY L domain-like 340 624 - -
Adu07g00835 1014 SMART LRR_typ_2 392 416 IPR003591 -
Adu07g00835 1014 SMART LRR_typ_2 513 537 IPR003591 -
Adu07g00835 1014 SMART LRR_typ_2 120 144 IPR003591 -
Adu07g00835 1014 SMART LRR_typ_2 561 584 IPR003591 -
Adu07g00835 1014 SMART LRR_typ_2 585 610 IPR003591 -
Adu07g00835 1014 SMART LRR_typ_2 440 463 IPR003591 -
Adu07g00835 1014 SMART LRR_typ_2 192 216 IPR003591 -
Adu07g00835 1014 Gene3D Ribonuclease Inhibitor 331 642 IPR032675 -
Adu07g00835 1014 ProSiteProfiles Protein kinase domain profile. 707 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00835 1014 SUPERFAMILY Protein kinase-like (PK-like) 688 1005 IPR011009 -
Adu07g00835 1014 Gene3D Transferase(Phosphotransferase) domain 1 789 1012 - -
Adu07g00835 1014 Pfam Leucine rich repeat 539 598 IPR001611 GO:0005515
Adu07g00835 1014 Gene3D Ribonuclease Inhibitor 167 330 IPR032675 -
Adu07g00835 1014 SMART serkin_6 707 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00835 Adu-Chr7 10517655 10521088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00835 24 1013 Receptor kinase-like Gene Family AT3G47570 44.835 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Adu07g00835 Pkinase 4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00835 - - ahf:112766919 1576.61