Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00834 ATGATAGCAGCTATCATCGTCTTCTTTCTTTGTTTTATTGCTTCACAAACCTTGTTAGTGTTCATGCCGTATGCTACAACAGCCGCTATGCCTTTGAGTTCAGAAACCGACAAGCTCGCTTTGTTAGCTTTGAAGGTAAAGCTTACCAATGGTAATCATGACAATAATGCTCTGCCATCATGGAATGAGTCTCTCCATTTCTGTGAATGGCAGGGCGTTACGTGCAGTCGCCGCCACAAGAGAGTCTCAGCCTTGCAACTGCAAAATCAAGACTTGGGAGGAACTCTTGGACCAACTCTTGGAAATCTAACCTTCCTCAAGAAGCTCAATCTCACTAACGTCAACCTGTATGGCGAGATTCCAAGAGAAGTTGGTCGTTTGAAGAGGCTTCAGATTCTCTGCTTAGACATGAATAATGTTCATGGGGAAGTTCCTATGGAGATAACCAACTGCTCCAAGCTTGAGGTAGTTTTCTTGATGCACAACAATCTCACTGGGAAAGTTCCTTCATGGTTTGGATCCATGGTGCACCTTACTTGGTTGCAACTTGGAGCCAATAATTTAGCTGGAAGAATTCCACCTTCCTTGGGAAATCTTTCATCGTTGGAGACTCTGTCACTTGCATACAATCATCTGGAAGGAAATATACCTCATGTTTTGGGTAGGTTATCCAATTTGAATTATATTTTTCTTGGTTCAAATAATTTGTCAGGCATGATTCCTCCTTCACTTTACAACCTTTCCAATATTCGAGATTTTCATTTAGGGAAAAACCAATTAGTGGGTACTCTTCCTTCAAATATAGACCATGCTTTTCCCAATCTCCAGCAGTTTACTATTCCATTGAACCAATTTACCGGAACTTTTCCATCTTCAATATCCAACCTGTCTCAGTTGCAACTGTTTGATATAGGAGTGAATAGTTTTAGAGGACCAATTCCTCTTACTTTGGGACGCTTGAACAAGCTTCAGGTACTTATAATGGATTATAACAATCTTGGAAGTGGACAACCTCATGATTTGGATTTCCTTTCCTCACTAACCAATCTTACTCAATTGCAAAGGTTGTCTTTTGAGGCAAATAATCTAGGTGGTGTATTGCCAGATCTCATAGGCAACTTATCTACCCATCTCTATTTACTTGATATGTGGGTTAATCAGATATCTGGGAGGATTCCTCAAACAATTGGCAACTTAATCGGCTTGACTACACTTATTTTGGCACAGAATTCCCTTGAGGGATCAATTCCAGATTCAGTTGGAAAGCTTAAAAATCTAGCAAGATTGAACTTGCAACAGAACAAGTTATCTGGTAACATTCCTTGTGTTATTGGCAATCTTACTATGTTATCTGAAGTTTATCTTGGCATCAATGAGTTAGAAGGAAGCCTTCCATTTACTCTTAGGTACTGCAGCATGATGCAGAAATTTGTTGTAGACACAAACTACTTAAGTGGTAATATACCCAATAATACATTTGGGTATCAAAAAGGTTTAATAACTCTTGATTTATCCATCAATGCCTTGACCGGTTCCGTTCCTTCAGATTTTGGTAACTTGAAACAACTTTCCATACTGTATCTACATACAAATAATTTGTCTGGTGAAGTTCCCCTGGAACTAGGTGCTTGTTCTGCTTTAACAGATTTTTGGCTGACGAGAAACTTCTTTCATGGAAGTATACCTTCGTTCTTTGGTTCTCTAAGAAATCTTGAAAACTTAGACTTCTCAATCAACAACTTCTCAGGCACAATTCCGAATGAACTTGAGAATCTGACTTTTCTGAATTATTTGAACTTGTCTTTTAACCATCTTTATGGTGAGGTCCCAATAGGAGGAATCTTTAGAAACATCACGGCAATGTCGCTCATTGGAAACGAAGATCTCTGTGGTGGGATACCTCAGCTGAATCTCCCTCCATGTCCTGAGTTGCTTTCACATAAACATAAGAGTTCTTTTAAAGTTACCCTGATCATTGTAATTAGTGGGGTTTCGGCATCTTTTCTGGTTTTCATCTGCATTTGTTATTTGAGGAAAAAGCCCAAAACATTATCTTCTTCACCATCACTGGAACATAGGTACTTGAAGGTTTCTTATGGAGAGCTACATCAAGCAACCGACGGATTTTCTTCATCAAATCTAGTTGGCACCGGAAGCTTTGGCTCTGTATATAAAGGAACACTTGTCCAATTTGAAAGACCTATTGCTGTGAAGGTGTTGAATCTTCAAACACATGGGGCATCAAAGAGTTTCATGGCCGAATGCAAAGCTCTCGGAAAAATCAGGCATCGGAATCTTCTAAATATACTGACTTGCTGTTCAAGTCTCGATTATAAAGGTGATGATTTTAAGGCCATAGTGTTTGATTTCATGTCTAACGGGAGTCTAGAGACCTTGTTGCACAACAATGAAGAAAAGGAGTCCAAAAACCTAAATCTCAACTTTGAACAAAGGGTTAACATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTCTGAGGAAGCTATAGTTCATTGCGATGTTAAGCCGAGCAATGTTCTTCTTGATGATGACATGGTTGCCCACTTGGGGGATTTTGGGCTTGCTAGGCTCCTTCATGGTCATGGAGGCATTGATTGTTCTAGTGGAGATCATGTTAGTTCATCTGCAATTAAGGGAACTATTGGATATCTTCCACCTGAGTATGGAGCAGGTGGCTCAGTGTCAGCAGAAGGAGACATGTATAGCTATGGAATTCTTCTTTTGGAGATGATCACTGGAAAGAAACCAACTGATAGCATATTCGGTGAAGGCCTAAGCTTACACTTGTTCTGTAACATGGCAATTCTTGAAGGAATCAGTGAGATTGTTGATTCAAGATTGCTCATTCCAATTACTGAACAAGAGGGAAGAAGGGTCACAAGGCAGCAAAATATGGAAGACACCATTCGAGAATGTCTTGTGTCTTTTACTAGGATTGGAATTGCATGTTCTGAAAAGGTTCCATCTCAACGAATGGGCATAAAAGATGTCATAATGGAGTTACATGCAATTAAACAGAAACTGCTTTCATAA 3066 0.395 MIAAIIVFFLCFIASQTLLVFMPYATTAAMPLSSETDKLALLALKVKLTNGNHDNNALPSWNESLHFCEWQGVTCSRRHKRVSALQLQNQDLGGTLGPTLGNLTFLKKLNLTNVNLYGEIPREVGRLKRLQILCLDMNNVHGEVPMEITNCSKLEVVFLMHNNLTGKVPSWFGSMVHLTWLQLGANNLAGRIPPSLGNLSSLETLSLAYNHLEGNIPHVLGRLSNLNYIFLGSNNLSGMIPPSLYNLSNIRDFHLGKNQLVGTLPSNIDHAFPNLQQFTIPLNQFTGTFPSSISNLSQLQLFDIGVNSFRGPIPLTLGRLNKLQVLIMDYNNLGSGQPHDLDFLSSLTNLTQLQRLSFEANNLGGVLPDLIGNLSTHLYLLDMWVNQISGRIPQTIGNLIGLTTLILAQNSLEGSIPDSVGKLKNLARLNLQQNKLSGNIPCVIGNLTMLSEVYLGINELEGSLPFTLRYCSMMQKFVVDTNYLSGNIPNNTFGYQKGLITLDLSINALTGSVPSDFGNLKQLSILYLHTNNLSGEVPLELGACSALTDFWLTRNFFHGSIPSFFGSLRNLENLDFSINNFSGTIPNELENLTFLNYLNLSFNHLYGEVPIGGIFRNITAMSLIGNEDLCGGIPQLNLPPCPELLSHKHKSSFKVTLIIVISGVSASFLVFICICYLRKKPKTLSSSPSLEHRYLKVSYGELHQATDGFSSSNLVGTGSFGSVYKGTLVQFERPIAVKVLNLQTHGASKSFMAECKALGKIRHRNLLNILTCCSSLDYKGDDFKAIVFDFMSNGSLETLLHNNEEKESKNLNLNFEQRVNIALDVAFALDYLHNDSEEAIVHCDVKPSNVLLDDDMVAHLGDFGLARLLHGHGGIDCSSGDHVSSSAIKGTIGYLPPEYGAGGSVSAEGDMYSYGILLLEMITGKKPTDSIFGEGLSLHLFCNMAILEGISEIVDSRLLIPITEQEGRRVTRQQNMEDTIRECLVSFTRIGIACSEKVPSQRMGIKDVIMELHAIKQKLLS 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00834 1021 SMART serkin_6 709 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00834 1021 SMART LRR_typ_2 350 373 IPR003591 -
Adu07g00834 1021 SMART LRR_typ_2 199 223 IPR003591 -
Adu07g00834 1021 SMART LRR_typ_2 399 423 IPR003591 -
Adu07g00834 1021 SMART LRR_typ_2 592 617 IPR003591 -
Adu07g00834 1021 SMART LRR_typ_2 247 271 IPR003591 -
Adu07g00834 1021 SMART LRR_typ_2 520 544 IPR003591 -
Adu07g00834 1021 SUPERFAMILY L domain-like 376 631 - -
Adu07g00834 1021 SUPERFAMILY L domain-like 63 374 - -
Adu07g00834 1021 Gene3D Ribonuclease Inhibitor 346 642 IPR032675 -
Adu07g00834 1021 Pfam Leucine rich repeat N-terminal domain 35 76 IPR013210 -
Adu07g00834 1021 Pfam Leucine rich repeat 153 212 IPR001611 GO:0005515
Adu07g00834 1021 ProSiteProfiles Protein kinase domain profile. 709 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00834 1021 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 31 1019 - -
Adu07g00834 1021 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Adu07g00834 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Adu07g00834 1021 SUPERFAMILY Protein kinase-like (PK-like) 685 1015 IPR011009 -
Adu07g00834 1021 Gene3D Phosphorylase Kinase; domain 1 673 790 - -
Adu07g00834 1021 Gene3D Transferase(Phosphotransferase) domain 1 791 1020 - -
Adu07g00834 1021 Pfam Protein kinase domain 711 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00834 1021 PANTHER LRR RECEPTOR-LIKE KINASE 31 1019 - -
Adu07g00834 1021 Gene3D Ribonuclease Inhibitor 193 345 IPR032675 -
Adu07g00834 1021 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00834 Adu-Chr7 10493411 10496787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00834 32 1020 Receptor kinase-like Gene Family AT3G47570 44.711 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Adu07g00834 Pkinase 2.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00834 - - ahf:112766919 1297.34