LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu07g00831	ATGTTGTCAGAAGTTTATATGGACTCAAATAACCTTGAGGGAAGCATTCCATTTACCTTGAGATATTGCACAAATATGCAGACTTTCGCTGCCGGGGACAACAATTTAAGTGGTAGCATACCAACTCAAACCTTTGGATACCAACAAGATCTTGTACTAAAAAGAAACTCGTTCCATGGAAGTATACCTTCATTTTTGGGATCTCTACTATCCCTTGAATTCTTAGACCTTTCTAATAACAACTTAAGCATAATCCCTTATGAACTTGTGAATCTCAAATTTCTGAGTATGTTGAACTTATCTTTCAACCATCTCTTTGGTGAAGTCCCGGTAGGAGGAGTATTTAATAATGTCACAGCAATATTACTCGTTGGAAACAAAGATCTCTGCGGAAAAATCAAGCACAGAAACCTTGTCAACATATTAACTTGTTGTTCAAGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTTTAGAAACCTTGTTGAACAACAACATTGAAGATAGCGAGTCCACAAATTGGAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTTAGAAGAAGCTGTAGTTCATTGTGATATAAAGCCAAGCAATGTTGTACTTGATGATGAAGTTGTTGCTCACTCGGGAGACTTTGGATTATCTAGGCTCGTTCATGGTGCTGCAAGCTGTTCTAGCAGTGGTCAAGTTAACTCTTCTGCAATTAAGGGAACCATTGGATATATTCCCCCAGAATATGGAGCAAGTGGCTTAGTGTCACCAGAAGGAGACATGTATGGCTATGGAATTCTTCTTTTAGAGATGATCACTGGAAAGAAGCCAACTGATAGCATGTTTGGTGAAGATCTAAGCCTACACAAGTTCTGTAACATGGCAACTCTAGATGGAATCACTGATATTGTTGATCCAAGATTGCTCATTCCAATTGATCATCAAGAAAGAAGAAGGGTCACACAACAGCAAAATATAGAAGACACC	1050	0.3838	MLSEVYMDSNNLEGSIPFTLRYCTNMQTFAAGDNNLSGSIPTQTFGYQQDLVLKRNSFHGSIPSFLGSLLSLEFLDLSNNNLSIIPYELVNLKFLSMLNLSFNHLFGEVPVGGVFNNVTAILLVGNKDLCGKIKHRNLVNILTCCSSVDYKGDDFKAIVFEFMPNGSLETLLNNNIEDSESTNWSLNLMQRVNIALDVAFALDYLHNDLEEAVVHCDIKPSNVVLDDEVVAHSGDFGLSRLVHGAASCSSSGQVNSSAIKGTIGYIPPEYGASGLVSPEGDMYGYGILLLEMITGKKPTDSMFGEDLSLHKFCNMATLDGITDIVDPRLLIPIDHQERRRVTQQQNIEDT	350

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu07g00831	350	PRINTS	Leucine-rich repeat signature	72	85	-	-
	Adu07g00831	350	PRINTS	Leucine-rich repeat signature	92	105	-	-
	Adu07g00831	350	PANTHER	LRR RECEPTOR-LIKE KINASE	131	340	-	-
	Adu07g00831	350	PANTHER	LRR RECEPTOR-LIKE KINASE	66	133	-	-
	Adu07g00831	350	ProSiteProfiles	Protein kinase domain profile.	47	350	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu07g00831	350	ProSiteProfiles	Leucine-rich repeat profile.	71	93	IPR001611	GO:0005515
	Adu07g00831	350	SUPERFAMILY	L domain-like	2	131	-	-
	Adu07g00831	350	PANTHER	LRR RECEPTOR-LIKE KINASE	1	69	-	-
	Adu07g00831	350	PANTHER	LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED	1	69	-	-
	Adu07g00831	350	PANTHER	LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED	131	340	-	-
	Adu07g00831	350	PANTHER	LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED	66	133	-	-
	Adu07g00831	350	SMART	serkin_6	72	342	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu07g00831	350	SUPERFAMILY	Protein kinase-like (PK-like)	130	314	IPR011009	-
	Adu07g00831	350	Gene3D	Transferase(Phosphotransferase) domain 1	163	347	-	-
	Adu07g00831	350	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	213	225	IPR008271	GO:0004672\|GO:0006468
	Adu07g00831	350	Pfam	Protein kinase domain	131	312	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu07g00831	350	Gene3D	Ribonuclease Inhibitor	1	150	IPR032675	-
	Adu07g00831	350	Pfam	Leucine rich repeat	50	105	IPR001611	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu07g00831	Adu-Chr7	10324084	10401572	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu07g00831	133	330	Receptor kinase-like Gene Family	AT3G47570	49.246	5.97e-61	209

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XII-1	Adu07g00831		Pkinase	2.9e-26	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu07g00831	-		-	ahf:112702394	406.757