Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00819 ATGGCTTCAACAAATTTGCCTTCAGGTGCAAGCAAGAAGTTCAAACCTACAGATAAAGAACTCATTCAAGATTTTCTCCATAACAAAATCAATGAGAGGCCTTTACCAAACTATGAAACCATTCTTGAAGGTGAATTGTTTGGTACGGAGAAGAATCTATTGAAAATTTGGGAAGAACACGTTGAAAATTTTTATCACGGGAAGGACCTCTATTTCTTCACTACTCTGAAGAGAAAGTTCTCGACTAACAGCTTGAGGATGGTTCGCACCATCGGGTTGGGTTCTTGGGAAGATGAAGACATCGGAAAAGAGATTATGGCCAATAAAACTAACCAGTGCATTGGAATGAGGAAATGA 357 0.3894 MASTNLPSGASKKFKPTDKELIQDFLHNKINERPLPNYETILEGELFGTEKNLLKIWEEHVENFYHGKDLYFFTTLKRKFSTNSLRMVRTIGLGSWEDEDIGKEIMANKTNQCIGMRK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00819 118 Gene3D NAC domain 17 118 IPR036093 GO:0003677|GO:0006355
Adu07g00819 118 ProSiteProfiles NAC domain profile. 8 118 IPR003441 GO:0003677|GO:0006355
Adu07g00819 118 SUPERFAMILY NAC domain 12 118 IPR036093 GO:0003677|GO:0006355
Adu07g00819 118 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 118 - -
Adu07g00819 118 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 118 - -
Adu07g00819 118 Pfam No apical meristem (NAM) protein 13 118 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00819 Adu-Chr7 10158538 10158894 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00819 6 118 NAC Transcription Factor Family AT2G24430 33.628 4.04e-09 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu07g00819 NAM 1.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00819 - - adu:107457660 246.128