Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00763 ATGCCCCAAACTAAATCATCCAAAAGAAAAGCGCTGTTCAAGGTTGCGATGATGATCCAAGACAACACCAAATTTGACGAAGAAGCAGATCGAATCAAGGGGTCATGGACTCCTCAAGAGGATGCAACGCTTCTGAAGCTGGTGGCGCAGCACGGAGCACGGAACTGGTCCGTCATAAGCAACGGGATACCGGGCCGATCGGGAAAGTCATGCCGACTGCGGTGGTGCAACCAGCTCAGCCCCGACGTTCAGCACCGACCGTTCACCCCTGCGGAGGACGAAATCATCCTTAAGGCTCACGCCGTACACGGCAACAAGTGGGCCACCATCTCCAGACTCCTTCCTGGCCGCACCGACAACGCTATCAAGAACCACTGGAACTCCACCCTCCGCCGCCGTAAAGGTGTAACCGTCGCCTTTTCCGGCGCCGGATTCCCCTCCGCGGCAGCCACCGACGCCTCCACCAGCGGAGGATTATCCGGATTCTCTTCTGCCGCCACGTCGTCGTCATCAGATTTCAGTCCAACATTTGTTTGCCAAAAGCGCAAGGGCGAGCAGTTAGAGTTGCCACAGAATTTCATGAAGAAGCCATGTTTGGCGGCAGTTGCCGTCGACAGTCACGCGGAGGAGGAGGTTCGCCAAAAGCGGAAGGCCGAAGAAGAAGAAGAAGGCGGCGTGACGACACTGAGTTTGCTCCCGCCCGGAGAGAAGCCTTTGGGCGCAGAGGGAGTGTGGCGGAAGGAGGAGGAAGTCAATCCGTACGGCGAGCATGCATGGTTGATGAAGATGATGCGGCCCATGATAGCAGAAGAGGTTAGGAGATACATTCAAAGCTTACAAAAGGCTCAACCACTCTTTGACCCTGATCCACCTAGTAAAAATTTTTAA 888 0.5518 MPQTKSSKRKALFKVAMMIQDNTKFDEEADRIKGSWTPQEDATLLKLVAQHGARNWSVISNGIPGRSGKSCRLRWCNQLSPDVQHRPFTPAEDEIILKAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRRKGVTVAFSGAGFPSAAATDASTSGGLSGFSSAATSSSSDFSPTFVCQKRKGEQLELPQNFMKKPCLAAVAVDSHAEEEVRQKRKAEEEEEGGVTTLSLLPPGEKPLGAEGVWRKEEEVNPYGEHAWLMKMMRPMIAEEVRRYIQSLQKAQPLFDPDPPSKNF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00763 295 Gene3D - 87 133 - -
Adu07g00763 295 MobiDBLite consensus disorder prediction 210 224 - -
Adu07g00763 295 CDD SANT 35 77 IPR001005 -
Adu07g00763 295 MobiDBLite consensus disorder prediction 150 175 - -
Adu07g00763 295 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 20 256 - -
Adu07g00763 295 MobiDBLite consensus disorder prediction 210 243 - -
Adu07g00763 295 SMART sant 32 81 IPR001005 -
Adu07g00763 295 SMART sant 84 132 IPR001005 -
Adu07g00763 295 PANTHER MYB PROTEIN-RELATED 20 256 - -
Adu07g00763 295 CDD SANT 87 130 IPR001005 -
Adu07g00763 295 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Adu07g00763 295 Gene3D - 32 84 - -
Adu07g00763 295 Pfam Myb-like DNA-binding domain 33 79 IPR001005 -
Adu07g00763 295 Pfam Myb-like DNA-binding domain 87 129 IPR001005 -
Adu07g00763 295 ProSiteProfiles Myb-like domain profile. 28 79 IPR001005 -
Adu07g00763 295 SUPERFAMILY Homeodomain-like 30 126 IPR009057 -
Adu07g00763 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 134 IPR017930 -
Adu07g00763 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 79 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00763 Adu-Chr7 9033483 9034458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00763 30 174 MYB Transcription Factor Family AT4G37260 57.325 2.68e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu07g00763 Myb_DNA-binding 7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00763 - - ahf:112702359 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00763 07 9033483 9034458 Adu07g00763 07 9033483 9034458 ECH