Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00739 ATGGTAGGAAAAAGGAAGTATTTGCATCAATCCAAGCATCCATTCAATGCTTACCCCTTTGAAGCATGTGTGTATGGTTCATGGAAAGCGGTGGAGTTCATAAAAATTGAGTATGGAGTTATGTCCATACATTTCATTGATAAACGCCATATTTCTATGGAAAAAGGCCCCTCTGCAGACGTTCGGATAAGGTCGAGAATAGCTACTACTGCAGATTGCTCCTGCATTTTACGACGGGGAATTGATGTATGTGTGCTATCATCTCCTCAAGGAACTGGTGATTCGGATGAATTTGGTGCTCGTGAGCCTGTTTGGAGAGATGCTAGAATTAGTTCTATACAGAGAAAGCCCCATGATTCTGAGTGCACATGCCAATTTTATGTCAACTACTATGTTAATCAAGGTTCGCTTGGTGCAGAGATGAAAACGCTTAACAAGGATATTAATGTGGTTGGATTAGATCATGTCTTCATCCTCCAAAGGCTTGAACATACACACTGTGATGAAGATCAGCACTATCGGTGGACTTCAACAGAGGACTGCTCTAGAATACCACAAACTAGATTGCTGTTGGGGAAATTTTTACCTGATATTTCGTGGTTGATCGCGACATCTGTTTTAAAGAAGGTTTCTTTCTTTATAAGATCTGTGGAAAACAAGCTTGTTTATGAAGTTCTGTCAAATGACATTGTTATCCCTCCGTTCCATACCGAGTCTCATATAAATGTTGTAAACTTCAAACTGGAGAAAGACATGCTAATACCTATTGTTTCTCAAGTTATTGTATCCAGAACTGAGAGGGTTGACTATGAACATCAAGAATCCCATGAAGATGAAGTGTCACCATCATCATATAATGTTCAAGGCTTGCGGCGTTCCAAGCGCCGACATGTACAACCTGACCGTTACCTTGGTTGCAATAGTGCTCCTGAGCTCAATATTGGTACTATTAGAACAAGGCCATACAAATTAGGCACATGGGAACAAGTTGATGAAGATCATGAACTGTCAATGCCATTATCTTCCCTGTTTGGATTGAAACAAATCAGTCAAGATCAGGATCTTGATAGTAGTCCTAAGGAGGACAAGGTGAACGGTTGCCAGGAGATTATAGTGTACAATAGGAGGGCTAAAGCCAAGGAGGCGAAGACAGGCGATGCTGATCGAGACATACAGCTCAATGAACTTGCTATTATTCCTCATCCTACTCTTAAACATCATAAGCTCAATGACATGAATTGTAGAATTGGCAAACAAGAACCAGACGAAACTCCTTCGAAATATAGTCATCTGGTTAATACCACTAAGCAGAGAAGGAATAGTGTCAATCTGTTGAATTTCAATCCAGATAATGTGCTTGCGCAGTTAGAGGAGGTGGAGAAAAGTGATGGTTTTTCTTCAAGATTGCATTATACTTATAGTTACAGCACCTCCAAGTTTCAGAGGAAGGCTTTAAGTGATCTTGATGATATGAATCTTGCACCAAAATGGGAAGGCATACATTCCAGTAAGGGAGCTCAAGATAGAAGGTACCGTCCGGCATTTTCGAGAAATAGACATCCTGATGAAGAGAGAACTTATAAAGACAGAACATTGAATGCCACAGCCTACAAGGAGTTGATAAATTCCTACTTAAAGAATATTAACACGAAACCAACGAAAGAAGAAATGCCTATTAGCGACCAGTGGAAGCAGTTCCAGGATTCGCGCAGTGTCGGGAAAACGAAGGAAATACAAATATCCGATACCGATTATGCAGAAGAAACCTCTGAGTTGGATAATTTGTGGAGAGAAATGGAAGTGTCTCTGGCATCAAGTTACATTGAAGACACAGAGGAAGCGAATGCAGCCAATCTTTTCGACACTCAGGAAAAATCAAAGGAAGCTTGTGAACATTACTTTAGATTGGATGATGAAATTGGAATTTGCTGCAAGAAATGTGGCTTTGTGGAGATGGACATTAAAGCTATCACACCAGCCTTTCTTCAACATTCAGTGTGGCACCAAGAGGAGAGGCAGAACGACGGCAAAGAAGATGCAGAATCGAAGTCTGCTGAATTTGAAGATTTCAATCTTGTCTCAAATGTTGAGAATGAAGATGAACCTGTATCAGTGGAACATGATAATGTGTGGGCATTAATTCCGGATCTTCGAAAGAAGTTGCACCTCCACCAAAAGAAAGCTTTTGAGTTTCTTTGGAGAAACATTGCCGGGTCTACAGAACCAGCACTTATGGACAAGAACTCCAGAAAAAGAGGTGGCTGTGTGATATCTCATACTCCGGGAGCCGGAAAAACTTTCCTGATTATTGCTTTTCTAGTTAGCTACTTGAAGTTATTCCCTGGAAAGAAACCTCTAGTCCTTGCACCAAAAACAACACTTTATACCTGGTATAAAGAATTTATCAAGTGGGAGATTCCAATACCGGTGTATCTAATTCATGGTCGAAGAACCTACAGGGTATTCAACCAGAAACAATCAATGGTTTTTCCCGGAATGCCAAAGCCGACGGAGGATGTCAAGCATGTTTTAGATTGCCTAGAGAAAATACAGAAGTGGCATTCACACCCAAGTGTTCTAATCATGGGATATACTTCATTTTTGACATTGATGCGAGAGGATTCAAAGTATGCACATAGAAAGTATATGGCTAAAGTTCTGAGGGAAAGTCCCGGACTCCTAGTATTGGATGAAGGGCACAATCCGAGAAGCACCAAGTCCAGGTTGAGGAAAGTTTTGATGAAGGTACAAACAGAATTAAGAATACTGCTGTCTGGCACATTGTTTCAGAACAATTTCTGTGAATACTTCAACACTCTCTTGTTGGCAAGACCAAAGTTTGCACATGAGGTGCTGAAAGTATTAGACCCGAAATACAAGAAGAAGAAAGGAAAAGTGAGGGCAGTGGAGTACCGGGCAAGGAAATTCTTCATAGAAGTGATCTCTAGGAAAATCGACTCGAACAATGGCGAGGAGAGGATGCAAGGTCTTAACATGTTGAGAAATTTAACAAATGGTTTTATAGATGTTTATGAAGGTAGTAGCTCGGACGACCTACCCGGTTTGCAAATTTATACTTTGTTGATGAACACAACCGATATGCAGCATGAGATGTTGAAGAGACTGCACAAGAAAATGCAAAAGTGCAATGGATATCCTCTGGAGTTAGAGCTTTTGATAACTCTTGGGTCCATACATCCTTGGTTAATCAAAACTGCTGTATGTGCTAACAAGTTTTTCACAATGGAGGAACTAAGGGAGCTAGAGAAATGCAAGTTTGATTTGAAGATGGGGTCTAAGGTAAAATTTGTTATGAGTCTTATCTATCGCGTGGTCCAGAAGGAGAAGATCCTCATCTTCTGCCACAACATTGCACCAGTGAAGTTATTTATAGAATATTTTGAGTTGTTCTTCAAATGGCAAAAAGGGCGGGAAATTCTGGTGTTAACCGGGGAGCTAGAGCTCTTCGAGCGCGGCAGAGTGATGGATAAGTTTGAGGAACCTGGTGGAGTTTCAAAGATACTCCTTGCTTCGATTACAGCTTGTGCCGAAGGCATTAGTTTGACGGCAGCTTCTCGGGTGATCATGCTGGATTCCGAGTGGAATCCGTCGAAAACAAAGCAGGCCATCGCAAGGGCTTTTCGTCCCGGCCAGCGGAGGACAAGTCCAAGTCATTCCATATGA 3684 0.4131 MVGKRKYLHQSKHPFNAYPFEACVYGSWKAVEFIKIEYGVMSIHFIDKRHISMEKGPSADVRIRSRIATTADCSCILRRGIDVCVLSSPQGTGDSDEFGAREPVWRDARISSIQRKPHDSECTCQFYVNYYVNQGSLGAEMKTLNKDINVVGLDHVFILQRLEHTHCDEDQHYRWTSTEDCSRIPQTRLLLGKFLPDISWLIATSVLKKVSFFIRSVENKLVYEVLSNDIVIPPFHTESHINVVNFKLEKDMLIPIVSQVIVSRTERVDYEHQESHEDEVSPSSYNVQGLRRSKRRHVQPDRYLGCNSAPELNIGTIRTRPYKLGTWEQVDEDHELSMPLSSLFGLKQISQDQDLDSSPKEDKVNGCQEIIVYNRRAKAKEAKTGDADRDIQLNELAIIPHPTLKHHKLNDMNCRIGKQEPDETPSKYSHLVNTTKQRRNSVNLLNFNPDNVLAQLEEVEKSDGFSSRLHYTYSYSTSKFQRKALSDLDDMNLAPKWEGIHSSKGAQDRRYRPAFSRNRHPDEERTYKDRTLNATAYKELINSYLKNINTKPTKEEMPISDQWKQFQDSRSVGKTKEIQISDTDYAEETSELDNLWREMEVSLASSYIEDTEEANAANLFDTQEKSKEACEHYFRLDDEIGICCKKCGFVEMDIKAITPAFLQHSVWHQEERQNDGKEDAESKSAEFEDFNLVSNVENEDEPVSVEHDNVWALIPDLRKKLHLHQKKAFEFLWRNIAGSTEPALMDKNSRKRGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKKPLVLAPKTTLYTWYKEFIKWEIPIPVYLIHGRRTYRVFNQKQSMVFPGMPKPTEDVKHVLDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKYAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKVLMKVQTELRILLSGTLFQNNFCEYFNTLLLARPKFAHEVLKVLDPKYKKKKGKVRAVEYRARKFFIEVISRKIDSNNGEERMQGLNMLRNLTNGFIDVYEGSSSDDLPGLQIYTLLMNTTDMQHEMLKRLHKKMQKCNGYPLELELLITLGSIHPWLIKTAVCANKFFTMEELRELEKCKFDLKMGSKVKFVMSLIYRVVQKEKILIFCHNIAPVKLFIEYFELFFKWQKGREILVLTGELELFERGRVMDKFEEPGGVSKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQRRTSPSHSI 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00739 1227 Gene3D - 1020 1224 IPR027417 -
Adu07g00739 1227 SMART ultradead3 717 955 IPR014001 -
Adu07g00739 1227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 686 948 IPR027417 -
Adu07g00739 1227 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 21 1220 IPR044567 GO:0080188
Adu07g00739 1227 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 21 1220 - -
Adu07g00739 1227 SMART helicmild6 1132 1217 IPR001650 -
Adu07g00739 1227 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1103 1227 IPR001650 -
Adu07g00739 1227 MobiDBLite consensus disorder prediction 271 292 - -
Adu07g00739 1227 Gene3D - 688 976 IPR038718 -
Adu07g00739 1227 CDD SF2_C_SNF 1092 1220 - -
Adu07g00739 1227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 891 1220 IPR027417 -
Adu07g00739 1227 CDD DEXHc_ATRX-like 721 947 - -
Adu07g00739 1227 Pfam SNF2-related domain 726 956 IPR000330 GO:0005524|GO:0140658
Adu07g00739 1227 Pfam Helicase conserved C-terminal domain 1100 1216 IPR001650 -
Adu07g00739 1227 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 746 946 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00739 Adu-Chr7 8626591 8631563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00739 1096 1221 RAD5 or RAD16-like Gene Family AT5G43530 33.333 1.61e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Adu07g00739 SNF2_N 1.4e-16 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00739 K10875 - gmx:100811703 1600.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00739 07 8626591 8631563 Adu07g00739 07 8626591 8631563 ECH
Adu10g01047 10 18889928 18895526 Adu07g00739 07 8626591 8631563 PCT