Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00718 ATGGTTTCAAGAGAGCAAAAGAGAGCAGCACTACTGCATGAGAAGCTTCAACTCCTTCGTTCTGTTACCAACTCTCATGCTGTGAACAAAAGCTCCATCATAATCGATGCATCAAAGTATATTGAAGAGCTTAAAGAAAAGGTAGAAAGACTCAATCAAGAAATAGCCACAGCAGAAACTTCAAATCATCATCATCACCATAATCCTAATTTGCCTATGGTGACAGTAGAAACCCTAGAAAAGGGATTTATGATAAATGTAATTTCAGGAAGAAGCTGCCAAGGACTACTTGTTTCAATTCTTGAAGCCTTTGAAGACATGGGTCTCACCGTTCTTGAAGCTAGGGTTTCTTGTACGGACACTTTTCGATTCCAAGCAGTTGGAGGAGAAAATGATGAACAAGGTGACACTATTGATGCACAAGCTGTGAAACAAGCAGTGGGACAAGCAATAAAGAATTGGAGCCAACAAAGTGCTGATCAAGATTAA 489 0.3967 MVSREQKRAALLHEKLQLLRSVTNSHAVNKSSIIIDASKYIEELKEKVERLNQEIATAETSNHHHHHNPNLPMVTVETLEKGFMINVISGRSCQGLLVSILEAFEDMGLTVLEARVSCTDTFRFQAVGGENDEQGDTIDAQAVKQAVGQAIKNWSQQSADQD 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00718 162 CDD ACT_UUR-ACR-like 95 151 - -
Adu07g00718 162 Gene3D - 2 71 IPR036638 GO:0046983
Adu07g00718 162 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 67 IPR036638 GO:0046983
Adu07g00718 162 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 160 - -
Adu07g00718 162 Coils Coil 34 61 - -
Adu07g00718 162 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00718 Adu-Chr7 8384618 8386443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00718 5 147 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.032 9.62e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00718 - - tcc:18600910 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00989 10 17198806 17201207 Adu07g00718 07 8384618 8386443 ECH
Adu04g02030 04 99809453 99812687 Adu07g00718 07 8384618 8386443 ECH
Adu01g00506 01 6980883 6988855 Adu07g00718 07 8384618 8386443 ECH
Adu07g00718 07 8384618 8386443 Adu07g00718 07 8384618 8386443 ECH
Adu10g00989 10 17198806 17201207 Adu07g00718 07 8384618 8386443 PCT