Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00713 ATGTCCAGAGAAAGGGAGAGATCAGATGATGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGGTCAAAAAGGAAGGAGACAACACATGTTAGGTAGTCAACAAGAAGGTGCTTCTGGAGGAACCATAAATACAATCACCCCTTGTGCTGCATGTAAGCTCTTGAGAAGAAGATGTGCTCAAGAATGTCCCTTTTCTCCTTATTTCTCTCCTCATGAGCCCCAAAAGTTTGCTTCTGTTCACAAAGTCTTTGGTGCCAGCAATGTCTCAAAGTTGTTAATGGAAGTGCCTGAGAATCAAAGGGCTGATGCTGCAAATAGTCTAGTTTATGAAGCAAATGTGAGGCTAAAAGATCCAGTTTATGGATGCATGGGTGCAATCTCTTCTTTGCAACAACAAGTCCAATATCTAATATCTGAACTCAATGCTGTGAGGGATGAAATAATCAAATACAAACTTAGGGAAGTTAATAATGCCATCATACCCTCATCTTCTCATCATGTAATGCTTCCTTCTTCATCATCATCGGAGGTCGTATCGATCGCCGTTCCGCCACCTCCGCCGCCACCTAATGATGACATACTTCCTCCTAATTCTTCAACTTCTTCTTCCATGGTTTACCCCCAACAGACTGATGATCCTTCCAATTATGGGACAATTTCAAGTGATAATATTTCCTATTTTGGTTGA 690 0.4159 MSRERERSDDEIGKKIKREGDGQKGRRQHMLGSQQEGASGGTINTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKLLMEVPENQRADAANSLVYEANVRLKDPVYGCMGAISSLQQQVQYLISELNAVRDEIIKYKLREVNNAIIPSSSHHVMLPSSSSSEVVSIAVPPPPPPPNDDILPPNSSTSSSMVYPQQTDDPSNYGTISSDNISYFG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00713 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 32 229 - -
Adu07g00713 229 MobiDBLite consensus disorder prediction 1 26 - -
Adu07g00713 229 ProSiteProfiles LOB domain profile. 47 148 IPR004883 -
Adu07g00713 229 Pfam Lateral organ boundaries (LOB) domain 48 144 IPR004883 -
Adu07g00713 229 MobiDBLite consensus disorder prediction 178 229 - -
Adu07g00713 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 229 - -
Adu07g00713 229 MobiDBLite consensus disorder prediction 181 195 - -
Adu07g00713 229 MobiDBLite consensus disorder prediction 1 39 - -
Adu07g00713 229 MobiDBLite consensus disorder prediction 196 229 - -
Adu07g00713 229 Coils Coil 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00713 Adu-Chr7 8331746 8333742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00713 41 229 AS2 family AT2G40470 66.842 1.34e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu07g00713 LOB 2.7e-39 No_clan