Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00664 ATGCAGGATCTTTCCAACGCAGCCGCCCTCTCATCTACGATCGACAGCGCCGCCCTCTCATCTGCACACAACGTAGCCGGTGTTCACTCCTTCAGAATGGCAGAATCGCAAGAAGAACGTGCTGCAAGTGAGGGTCCTCCTTTATGCACATCACCTAGCCGAAATTCATTAATGGAGGTTGATATAGTTGAACCATTAGTTTGTGTTGCCTCTGAAGTTTCTGAAAATTTATCAAACAAACAAGAAAACTTAGCCGCCGATGTTGCAGAGCACGGTCACAAGTCAAACAATTTGTCGGATGTTATGGATGTTGGAAGTGAAGAGATGGAGCCTAGTGATGAGTTACCAGATCATGGTAACCTACAAGAAGACGAGATACCAAGAGTTGGAATGCGATTTGCTCAGTTACAGATGGCGCATGACTTTTATGTGTCCTATGCAAAGAAACCTGGATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACGAAGGCTCCCATTAATCAAGCTATACACTGTAATCGCGACGGGATCCGCGAGTCTCGTGTTAAAGCACCAACGCAGAAGAATACGATTTCCGCTGCTGTGTGCAAGGCAAGGATATATTTAAAGTTTGATAAAGATGTGCAAGACTGGGTTTTGTTCaagGTTCCATTGGTCTGCGTGAAGGTGGAAGAGGAGAAACTACTCAACGATACTATTCTATGCATTCCGTATGATGTTCACTTTGACCGTTCCACACAGGAGCTTCGTTGTGAGTGCAATCTTTTTGAGAGTTCAAGTGTGTTGTGCTGTCACTGCGTTGAAGTTTACCATTCGTATAAAGTGTACAAAGTACCTTCCTGTTATGTTCTTCCTcgatggagcaagaagataaagcgcaagcatacgtatgtcaaaagtagccatgatgtcagtcagtcggatgagagtcaTGTTGCATTCAGGGGACTGTGTGCACACTTCTATAATGTTGCTCAAGAGTTCGTCGGTGACGATGAAGAAACAGCATTGCTGCATCTTGCTTTGGAAGAAACAAGGGCCAAGTTGGCTACGCACCGTGCCAAAAAGAGGTCCGAGAGTGTGGCAGAGACTCAGACCAACATTGGCTCACAGAGTTCGAACGATGTCGGTGTTGCTGACATCCAAGGCCCATCGAAGGTAACCACAAAGGGCAGGCCAAAGAGTAAGAGGCTCGGCTCTGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTCACCCCCGCAAGAGGTTCGTCTGGATGCATTTCAAGATGTAAACCATGGTTCTTTTACTGGCCTTAATGTTCCCGAACAAGCCGGTGGTTTCATGTCTTTGTTAAGCTCCTTCAACAAAAAGTAG 1383 0.4281 MQDLSNAAALSSTIDSAALSSAHNVAGVHSFRMAESQEERAASEGPPLCTSPSRNSLMEVDIVEPLVCVASEVSENLSNKQENLAADVAEHGHKSNNLSDVMDVGSEEMEPSDELPDHGNLQEDEIPRVGMRFAQLQMAHDFYVSYAKKPGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTQKNTISAAVCKARIYLKFDKDVQDWVLFKVPLVCVKVEEEKLLNDTILCIPYDVHFDRSTQELRCECNLFESSSVLCCHCVEVYHSYKVYKVPSCYVLPRWSKKIKRKHTYVKSSHDVSQSDESHVAFRGLCAHFYNVAQEFVGDDEETALLHLALEETRAKLATHRAKKRSESVAETQTNIGSQSSNDVGVADIQGPSKVTTKGRPKSKRLGSALEKSIKNSRRRKQKNSPPQEVRLDAFQDVNHGSFTGLNVPEQAGGFMSLLSSFNKK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00664 460 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 96 210 IPR031052 GO:0006355
Adu07g00664 460 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 238 326 IPR031052 GO:0006355
Adu07g00664 460 MobiDBLite consensus disorder prediction 364 382 - -
Adu07g00664 460 PANTHER OS03G0843700 PROTEIN 96 210 - -
Adu07g00664 460 MobiDBLite consensus disorder prediction 354 425 - -
Adu07g00664 460 PANTHER OS03G0843700 PROTEIN 238 326 - -
Adu07g00664 460 Pfam FAR1 DNA-binding domain 141 219 IPR004330 -
Adu07g00664 460 MobiDBLite consensus disorder prediction 33 54 - -
Adu07g00664 460 ProSiteProfiles Zinc finger SWIM-type profile. 241 277 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00664 Adu-Chr7 7327539 7331384 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu07g00664 FAR1 2.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00664 - - aip:107615899 441.425