Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00653 ATGCAAGTAGCAGAACTCCAACAAAACCTGGTTCAACACCAACACAAAGAGAACAAGATCATGTGCAAGAAGATCCAGCTAAGTGTCTCTGACACTGAACTCCATAATCACCATCATAATTCATGTGGTTGTGATGTTGATGGGTGCCACAAGGTTGAGGGTGAGGATCTATTCATTCCACCCCTCAATTTTGCAATGGTTGATAATGGCATTTTCAGGTCTGGTTTCCCTGAACCTGCTAACTTCTCCTTCCTTCAGACCCTTGCTCTCCGCTCTATCATATATCTATGTCCTGAGCCATATCCAGAGGCTAACATGGAGTTCCTCAAGTCAAATGGGATCAAGCTTTATCAATTTGGAATTGAGGGTCATAAGGAGCCTTTTGTAAACATCCCAGAAGACACAATCCGTGAAGCATTAAAAGTTGTCCTTGATGTCAGGAACCATCCACTTATAATTCATTGTAAGCGGGGGAAGCACCGAACGGGGTGTTTAGTAGGATGCTATAGGAAGTTGCAGAAATGGTGTTTGTCTTCTGTGTTTGATGAATACCAACGCTTTGCAGCTGCAAAAGCAAGAGTTTCAGATCAGAGGTTCGTTGAGTTGTTTGATATTTCAACCATCAAGCCTCTCCCTATAACATTTTCATCTTTCAAGAGGTTGGATTGA 669 0.4245 MQVAELQQNLVQHQHKENKIMCKKIQLSVSDTELHNHHHNSCGCDVDGCHKVEGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLALRSIIYLCPEPYPEANMEFLKSNGIKLYQFGIEGHKEPFVNIPEDTIREALKVVLDVRNHPLIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISTIKPLPITFSSFKRLD 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00653 222 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 59 205 IPR029021 -
Adu07g00653 222 CDD PFA-DSP_Siw14 57 204 - -
Adu07g00653 222 PANTHER TYROSINE-PROTEIN PHOSPHATASE 11 217 - -
Adu07g00653 222 ProSitePatterns Tyrosine specific protein phosphatases active site. 153 163 IPR016130 GO:0016311|GO:0016791
Adu07g00653 222 Gene3D Protein tyrosine phosphatase superfamily 57 207 IPR029021 -
Adu07g00653 222 PRINTS Plant and fungal dual specificity phosphatase signature 58 75 IPR020428 GO:0016791
Adu07g00653 222 PRINTS Plant and fungal dual specificity phosphatase signature 95 108 IPR020428 GO:0016791
Adu07g00653 222 PRINTS Plant and fungal dual specificity phosphatase signature 114 128 IPR020428 GO:0016791
Adu07g00653 222 PRINTS Plant and fungal dual specificity phosphatase signature 131 145 IPR020428 GO:0016791
Adu07g00653 222 ProSiteProfiles Dual specificity protein phosphatase domain profile. 63 217 IPR020422 GO:0006470|GO:0008138
Adu07g00653 222 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 11 217 - -
Adu07g00653 222 Pfam Tyrosine phosphatase family 59 210 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00653 Adu-Chr7 7038742 7044709 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00653 54 220 Protein tyrosine phosphatase (PTP) family AT4G03960 75.449 2.73e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00653 K18045 - gmx:100814279 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00653 07 7038742 7044709 Adu07g00653 07 7038742 7044709 ECH