Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00566 ATGGTTCATCGTGCCACCTCCATTTTCTGTGCTCGCCGTGCCATTTCTGTTCCAGTAATTTTAGAAAGAGGCAGAGGAGCTGCGGCTCTGAAACCCACAGTGACGGTTGCGGCGGCGGAGGTAAACGGATCAGGATCGATGCCATTATTGAAGGAAGTTAGATTATGTGGCGTAAGGAAGAGACCATGGGAAAGATTCGCCGCCGAAATCAGAGACCCGTTGAAGAAAGCAAGGGTTTGGCTCGGAACCTTCGATTCCGCCGAGGACGCCGCACGCGCTTACGACGCCACTGCAAGAACACTCCGGGGACCAAAAGCCAAGACCAATTTTCCTCATCGCTCAGGATCCAGCCGCCTCCATCATGCACAGTGTCTTCTCCTTCCTCTAATTTTTCTAGAATTATGA 405 0.5185 MVHRATSIFCARRAISVPVILERGRGAAALKPTVTVAAAEVNGSGSMPLLKEVRLCGVRKRPWERFAAEIRDPLKKARVWLGTFDSAEDAARAYDATARTLRGPKAKTNFPHRSGSSRLHHAQCLLLPLIFLEL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00566 134 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Adu07g00566 134 CDD AP2 57 112 IPR001471 GO:0003700|GO:0006355
Adu07g00566 134 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 25 120 - -
Adu07g00566 134 Gene3D AP2/ERF domain 55 113 IPR036955 GO:0003700|GO:0006355
Adu07g00566 134 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 25 120 - -
Adu07g00566 134 SUPERFAMILY DNA-binding domain 56 112 IPR016177 GO:0003677
Adu07g00566 134 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Adu07g00566 134 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Adu07g00566 134 Pfam AP2 domain 57 103 IPR001471 GO:0003700|GO:0006355
Adu07g00566 134 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00566 Adu-Chr7 5860697 5862255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00566 21 111 AP2-EREBP Transcription Factor Family AT1G50640 69.231 1.21e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu07g00566 AP2 1.3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00566 K09286 - nnu:104606510 118.242