Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00565 ATGGCCGGAACCTCGACGACGCCGGAGAAGTCGGCGACGGCGATGGCGCTGATGTCTCCGACGACCTCGCGGTCGGTGACGCAGACGGTGAACGGCTCACATAAGTTTGTGATCCAGGGTTACTCTTTGGCGAAGGGTATGGGAATCGGAAAACACATCGCGAGCGACGTTTTCTGTGTCGGAGGTTACCAGTGGGCGATCTACTTCTACCCCGACGGGAAGAATCCGGAGGATAACTCAGCTTACGTTTCGGCGTTCATCGCTCTCGCTAGCGAAGGAACCGATGTGAGGGCGCTTTTCGAGCTCACGCTTGTTGATCAGAGTGGACAGGGAAAGCATAAGGTCCATAGCCACTTCGATCGGTCGCTTGAGAGTGGACCTTACACCCTCAAGTACAAGGGAAGCATGTGGGGGTACAAGCGGTTTTTCAGACGGTCTGTGCTTGAAACCTCTGATTTTCTTAAGAACGATTGCTTGAAAATCAACTGTACAGTTGGAGTTGTGGTTTCAGCTACAGATTGTCCGCAACTTCACTCTATCAGTGTACCAGAGTCAGACATCGGATCTCATTTTGGTATGCTATTGGAAAATATGGAAGGGTCAGATGTTACTTTTAATGTAGCTGGGGAGAAGTTTCCTGCTCATAAGTTAGTGTTGGCTGCTAGATCCCCTCAATTTCGTTCGAAGTTTTTCGAAGGCTTAGATGCGGAAAAGCGAGAGATCACAATATCAGATTTAGAACCTAAGGTTTTTAAGGCCATGCTGCACTTTATCTATAGGGATACCCTTACAGAAGAGGTGGACATGGTTCCATCTACCACATATAGTGATTTTCCAGCTTCGGATACATTGAAAGGGAAGTTGTTAGCTGCAGCAGACAAGTATGGCTTGGAGAGGCTTAAACTGATGTGTGAATCTTGTCTTTGCAAGGACATTTGTGTGAGTTCCGTGGCCAATATTTTGACTTTGGCTGACAATTGCCATGCTACAGAGTTAAAATCTGTTTGCCTAAAATTTGCTGCTCAAAATCTAGCAGCTGTTATGAGGTCAGATGGATTTGAGCATATGAAAGAAAAATGCCCATGGCTACAGTCAGAGATCTTGAAGACAATTGCGGGCTGTGAGAGTGACAATTGCAGCGGAGGGGAAAAATCTCAGAGCGTGTGGGCGCAGCTATCAGAAGGTGGTGACACAAATGGTGATCATGCTGATAAAAATGATAAAGGCAAAGGAGAGGGAAAACCCTTTTCTGTCCAACTTCCCAATGTTTCAATGGGTAGTAGTTTAGGAAAAAGAGGTAGACCACTACTAGTGGTATGCGTATGCAGGTTTTTGTTGTCAATGTCACAAGTGATGTGTATGTTGCTAGTGCAGAGAAGTCACTAA 1386 0.4639 MAGTSTTPEKSATAMALMSPTTSRSVTQTVNGSHKFVIQGYSLAKGMGIGKHIASDVFCVGGYQWAIYFYPDGKNPEDNSAYVSAFIALASEGTDVRALFELTLVDQSGQGKHKVHSHFDRSLESGPYTLKYKGSMWGYKRFFRRSVLETSDFLKNDCLKINCTVGVVVSATDCPQLHSISVPESDIGSHFGMLLENMEGSDVTFNVAGEKFPAHKLVLAARSPQFRSKFFEGLDAEKREITISDLEPKVFKAMLHFIYRDTLTEEVDMVPSTTYSDFPASDTLKGKLLAAADKYGLERLKLMCESCLCKDICVSSVANILTLADNCHATELKSVCLKFAAQNLAAVMRSDGFEHMKEKCPWLQSEILKTIAGCESDNCSGGEKSQSVWAQLSEGGDTNGDHADKNDKGKGEGKPFSVQLPNVSMGSSLGKRGRPLLVVCVCRFLLSMSQVMCMLLVQRSH 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00565 461 Gene3D - 311 386 - -
Adu07g00565 461 ProSiteProfiles MATH/TRAF domain profile. 31 165 IPR002083 GO:0005515
Adu07g00565 461 MobiDBLite consensus disorder prediction 392 419 - -
Adu07g00565 461 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 4-LIKE 14 384 - -
Adu07g00565 461 SUPERFAMILY POZ domain 179 312 IPR011333 -
Adu07g00565 461 MobiDBLite consensus disorder prediction 398 412 - -
Adu07g00565 461 SMART math_3 36 148 IPR002083 GO:0005515
Adu07g00565 461 Pfam BTB/POZ domain 194 310 IPR000210 GO:0005515
Adu07g00565 461 Gene3D Potassium Channel Kv1.1; Chain A 177 306 IPR011333 -
Adu07g00565 461 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 14 384 IPR045005 GO:0016567
Adu07g00565 461 CDD BACK_AtBPM-like 309 370 IPR034090 -
Adu07g00565 461 CDD BTB_POZ_BPM_plant 187 309 - -
Adu07g00565 461 SUPERFAMILY TRAF domain-like 29 172 - -
Adu07g00565 461 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 30 169 IPR008974 GO:0005515
Adu07g00565 461 ProSiteProfiles BTB domain profile. 201 267 IPR000210 GO:0005515
Adu07g00565 461 SMART BTB_4 201 312 IPR000210 GO:0005515
Adu07g00565 461 CDD MATH 32 165 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00565 Adu-Chr7 5842826 5847443 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Adu07g00565 BTB 2.1e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00565 K10523 - gmx:100806769 684.1