Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00554 ATGATGGCTGCAAAGAATTTCTATAACGAGTATGCCCGACGTTTGGGTTTCAACCCCAAAGCTAGCCCTCAGAGTCGTTCGAAACCTGATGGGGCAAATGCGTATCGGGAATTTGTTTGTGGTGGCGATGGTTTAAAAAGAAAGCCTAATGAAACTTGTAATGCAATGATTAGGATAGAGCGAAAGGGTCAACATAAGTGGTTTGTTACAAAATTTGTGAAGGAGCATAGTCATTCCACGTCAAGTTCCGGTGAAGTGCACAGTCTTCAGCCACGTAGGCACTTTTCTAGCGTTGGAAGAACAATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCCAGCGGTGTCATGTATATATCTATGGATAGGGCTCCTGGGAATCGCAATTCCACTGAGAACATTCATGGTAGTAGGAATTTTCCTGCAGTTGGTGCTAAGACTAATCACCAAGTTTCTGCAGTTGTTACCAAGACTAATCACCAAGTTCCTGCAGTTGCTGCTAAGTCTAATCACCAAGTTCCTGCAGTTGTTGCGAAGACTAATCACCAAATAAAAAATTCTTCATCAATGAATTATACTGTTAAACAGCCTGTTCAGAAGAAGACACTTGGGAGGGATTGTCAGAACCTGCTGGAGTATTTTAAGAGAATGCAGGCGGAAAACCCTGGTTTCTTCTATGCTATACAACTTGATGAAGATAACCATATGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGAGTGCTTACAATCATTTTGGTGATGCAATTAATCTGGACACAACATTCAAAGTGTATCAATACAAAGTACCATTTGTACCATTCACCGGGGTAAACCATCATGGCCAGACAATTTTATTTGGTTCTGCACTCCTTTTGGATGATTCTGAAGATTCTTTTGTGTGGCTTCTCAAGACATTTCTGACAGCAATGAATGACCGCCACCCCATTTCTATCACTACTGGTCAAGATAGAGCCATTCAGAGTGCAGTTTCACAAGTTTTCCCCCATGCACGGCACTGTCTAAACAAGTGGGATGTCTTGAGAGAAGGTCAGGAAAGGTTGGCTCATGTATGTCACATGCATCCAAATTTTCAGGGTGAACTTTATAATTGTATTAACCTGACTGAAACGATTGAAGAGTTTGATTCATCTTGGAATTCTATTATGGAAAAGTATGAACTTGGAAGAAATGAATGGCTTCAGTCATTGTACAATGCTCGTGCTCAGTGGGTCCCAGCATATTTCCGTGATTCATTTTTTGCTGCAATATCTCCTAATCATGGATTTGATAGCTCTTTTTTCGATGGTTTTATTAACCCGCAAACAACATTACCAATTTTCTTTAGGCAGTATGAACAAGCTATGGAGATGTGGTTTGAAAGGGAAATAGAATTAGATTCTGAGACAATTTGCAGCCAACCTGTTTTGAAGACACCTTCACCAATGGAGAAACAGACTGCTAATCTTTATACACGAAAAGTATTTTCAAAGTTTCAAGAGGAACTAGTTGAAACTTTTGTTTATACTGCAAACAGAATTGAAGAAGAAGGGGCAAATAGCATATTCAGGGTTGCTAAATTTGAGGATGACCAAAAGGCATATATTGTCACATTAAACCATTCCGAGTTGAAGGCTGAGTGTAGTTGTCAAATGTTTGAGTATTCAGGCATTCTGTGTAGGCATGTCCTAACTGTTTTCACTGTTACTAATGTACTTACTTTACCATCCCATTACATCTTGAAACGGTGGACAAGGAATGCAAAAAGTTATGTTGGATTGGATGAACATGCCAGTGAATCACATGGACTGGATTCTATGACATCTCGTTATGGCACTCTGTGTCGAGAAGCCATAAAATATGCGGAGGATGGGGCAATATCTGTGGAAACTTATAGTGCTGCAATGGGTGCTCTTAGAGATGTAGGAAAGAAAGTTGCTGCCGCAAAGCGAAATTTTGCAAAAGTTGCACCGGCTAGTAGTAGGAGTATCAGCAATGCTCATGATGACAAGAAAAACCAGACTTCAAGATCAGATACACCCCCTCTTTTGTGGCCACGGCATGATGAAACAACAAGGAGGTTTAATCTTAATGATGCTGGTGCACCTGTTCAACAGTCATTTGGTGATCTAAACTTCCCTAGAATGGCTCCAGTATCTGTCCAGCGAGATGATGGTCAAGATGAAAACATGGTTGTTCTTCCCTGTATGAAATCAATGACATGGGTAATGGAAAATAGAAGCTCAACTCCGGGGAATAAAGTAGCTGTTATCAATCTGAAGTTACAAGATTATACCAAGGTTCCATCAGCAGAAACGGAGGTTAAGTTTCAGCTCTCTAGAGTTTCTTTGGAACCAATGTTGAAGTCTATGGCCGGCATCAGTGAACAACTTTCTACACCAGCTAATAAGGTTGCTGTAATAAATCTGAAGCTTCAAGACTCCGACACAATTTCTGGCGAGTCTGAAGTCAAGTTTCAGGTTTCCAGGGACACATTGGGTGCTATGCAACGATCAATGTCCTATATCCGTGAGCAACTTTCTTCTGATGGCTATGTGCAGTCAGATCCTATCTCTGTAACAAAAAGGCAGAAGAAGTGA 2601 0.4091 MMAAKNFYNEYARRLGFNPKASPQSRSKPDGANAYREFVCGGDGLKRKPNETCNAMIRIERKGQHKWFVTKFVKEHSHSTSSSGEVHSLQPRRHFSSVGRTMPETYQGVGLVPSGVMYISMDRAPGNRNSTENIHGSRNFPAVGAKTNHQVSAVVTKTNHQVPAVAAKSNHQVPAVVAKTNHQIKNSSSMNYTVKQPVQKKTLGRDCQNLLEYFKRMQAENPGFFYAIQLDEDNHMSNVFWADARSRSAYNHFGDAINLDTTFKVYQYKVPFVPFTGVNHHGQTILFGSALLLDDSEDSFVWLLKTFLTAMNDRHPISITTGQDRAIQSAVSQVFPHARHCLNKWDVLREGQERLAHVCHMHPNFQGELYNCINLTETIEEFDSSWNSIMEKYELGRNEWLQSLYNARAQWVPAYFRDSFFAAISPNHGFDSSFFDGFINPQTTLPIFFRQYEQAMEMWFEREIELDSETICSQPVLKTPSPMEKQTANLYTRKVFSKFQEELVETFVYTANRIEEEGANSIFRVAKFEDDQKAYIVTLNHSELKAECSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSYVGLDEHASESHGLDSMTSRYGTLCREAIKYAEDGAISVETYSAAMGALRDVGKKVAAAKRNFAKVAPASSRSISNAHDDKKNQTSRSDTPPLLWPRHDETTRRFNLNDAGAPVQQSFGDLNFPRMAPVSVQRDDGQDENMVVLPCMKSMTWVMENRSSTPGNKVAVINLKLQDYTKVPSAETEVKFQLSRVSLEPMLKSMAGISEQLSTPANKVAVINLKLQDSDTISGESEVKFQVSRDTLGAMQRSMSYIREQLSSDGYVQSDPISVTKRQKK 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00554 866 Pfam SWIM zinc finger 535 569 IPR007527 GO:0008270
Adu07g00554 866 MobiDBLite consensus disorder prediction 659 687 - -
Adu07g00554 866 SMART 26again6 546 573 IPR006564 GO:0008270
Adu07g00554 866 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 137 789 IPR031052 GO:0006355
Adu07g00554 866 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 114 IPR031052 GO:0006355
Adu07g00554 866 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Adu07g00554 866 Pfam FAR1 DNA-binding domain 6 79 IPR004330 -
Adu07g00554 866 Pfam MULE transposase domain 257 347 IPR018289 -
Adu07g00554 866 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 3 114 - -
Adu07g00554 866 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 137 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00554 Adu-Chr7 5777908 5782917 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu07g00554 MULE 4.2e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00554 - - aip:107608865 1721.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00554 07 5777908 5782917 Adu07g00554 07 5777908 5782917 ECH