Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00547 ATGGAAGAGAAAGCAGCAAGAACAATTGAAGGTCAACCCATAAGATGTAAAGCGGCGGTTGGAAGAGAACCAGGGGAGCCATTAATCATTGAAGAGATTATTGTGGCGCCTCCAATGGCACGTGAAGCAAGGATTAAAGTTATATGCTCTTCTCTTTGTTACAGCGATGTCACTTTTTGGAAGATGAAGGACCCCCCTGCAATTTGGCCAAGAATTTTCGGTCATGAGGCAATTGGGATTGTGGAGAGTGTAGGAGAGGATGTGACTGAAGTTACCAAAGGAGACATAGTTGTTCCAATTTTCTTGCCAGATTGTGGAGAGTGTGTGGATTGCAAATCAGAAAAGAGCAACCTATGTTCAAAATTCCCATTCAAAGTATCTCCATGGATGCCAAGATATGATAGTAGCAGATTCACTGATCTCAATGGACACATCATACACCATTTCCTTTTTGTTTCAAGTTTTACTGAGTACACTGTCGTTGACATTGCCAATCTAACCAAGATTCATCCCCTTGTTCCTCCAAACAAAGCATGCCTCCTCAGTTGCGGCGTATCGACCGGGGTAGGAGCTGCTTGGAAAGCAGCAAAAGTGGAACCAGGATCCAGTGTAGCTATTTTTGGACTAGGAAGCATTGGATTAGCAGTTGCTGAAGGAGCTAGACTTTGTGGAGCAACTAAGATTATAGGTGTAGATGTCAACCCAGATAAGTTTGAAATTGGAAAAAAGTTTGGAGTCACTGACTTTATTCAAGCTGGAGGAGACAAATCTGTGAGCCAGGTTATTATAGAGATGACTAGTGGAGGTGCAGACTATTGCTTTGAATGTGTTGGAAGGGCATCATTGGTCCTTGAAGCATATGCTTCTTGTAGGAAGGGTTGGGGGAAAACAGTTGTTTTAGGAGTGGACAAGCCAGGATCTTGTTTGAGCCTGAGCTCTAGTGAAGTCCTTTGTGATGGGAAGAGTCTCATAGGAGCCTTGTTTGGAGGACTCAAACCCAAATCTCATGTCCCTATTCTCCTTAAGCGCTACATGGACAAGGAACTGAATTTGGATGAGTTTATAACACATGAAGTGGACTTTAAGGACATCAATAAAGCATTCGATTTGCTGCTTAAAGGGGAGTGTCTGCGATGTGTGATTTGGATGGATAAATAA 1158 0.4292 MEEKAARTIEGQPIRCKAAVGREPGEPLIIEEIIVAPPMAREARIKVICSSLCYSDVTFWKMKDPPAIWPRIFGHEAIGIVESVGEDVTEVTKGDIVVPIFLPDCGECVDCKSEKSNLCSKFPFKVSPWMPRYDSSRFTDLNGHIIHHFLFVSSFTEYTVVDIANLTKIHPLVPPNKACLLSCGVSTGVGAAWKAAKVEPGSSVAIFGLGSIGLAVAEGARLCGATKIIGVDVNPDKFEIGKKFGVTDFIQAGGDKSVSQVIIEMTSGGADYCFECVGRASLVLEAYASCRKGWGKTVVLGVDKPGSCLSLSSSEVLCDGKSLIGALFGGLKPKSHVPILLKRYMDKELNLDEFITHEVDFKDINKAFDLLLKGECLRCVIWMDK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00547 385 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Adu07g00547 385 Gene3D - 188 326 - -
Adu07g00547 385 SUPERFAMILY GroES-like 334 382 IPR011032 -
Adu07g00547 385 SUPERFAMILY GroES-like 10 199 IPR011032 -
Adu07g00547 385 PANTHER ALCOHOL DEHYDROGENASE 9 382 - -
Adu07g00547 385 Gene3D - 19 378 - -
Adu07g00547 385 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 9 382 - -
Adu07g00547 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 346 IPR036291 -
Adu07g00547 385 Pfam Zinc-binding dehydrogenase 212 330 IPR013149 -
Adu07g00547 385 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00547 Adu-Chr7 5734321 5738759 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00547 41 186 Monolignol Biosynthesis Gene Families AT4G37970 29.333 1.87e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00547 K00121 - gmx:100806887 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00547 07 5734321 5738759 Adu07g00547 07 5734321 5738759 ECH