Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00543 ATGCAGGGTATGTGGTTGATGTTATTCTTGTTGGTGGCTATTGCATTTGGTAATTCAGATATTGATGCACTCCTTGAACTTAAGAAGGGTTTTCGAGACGATCCTGCCGGACTAGTTCTCGATTCGTGGAATTCCAAGTCCTTAGATTCTAATGGATGCCCTCAGAACTGGTATGGAATATTGTGTGGTGAGGGAAGTGTTACATCAATCATTTTGGACAATGCCGGGTTGGTCGGAGAGTTTAATTTCCCTGCAATTGGTGGCCTTAAAATGCTTCGCAACTTGTCTGTTTCGAACAACCAATTCGAAGGAAGTATCTTGCAAATTGGTCAGCTGGAATTGCTTGAATTTCTTGATTTGTCCCTCAACAAGTTTAATGGATTGTTACCCTCGAACTTTGTTGAATTGCGAAATTTAGTGTATCTGAATCTTTCTTCAAATGAATTTGAAGGTACTCTTCCTGTTGGGTTTGACAAACTTAGCAAGTTGAAGTATTTAGATTTGAACACTAATAATTTTTCTGGGGATATTATGCATATCTTTTCTCAGATGGGAAGTGTTGTGCATGTGGACTTAAGCCGCAACAGGTTTTCCGGGACACCGGATTTTGGACTCGGAGATGACTCGTTTCTCTCTTCGATTAAATACTTAAATGTTAGCCACAATTCTTTGACTGGTGAGCTTTTTGCTCATGATGGAATGCCTTACCTTGATAGTTTAGAGGTCTTTGATGCGAGTAATAATAAGTTAGAGGGTAACATACCTTCCTTCACATTCGTGGTATCGCTGCGTATTCTTCGACTTGAACGCAACCAATTGTCAGGTTTGCTACCACAAACTTTGTTGAAAGAAAGTTCAATGATGTTGTCTGAACTGGATCTCAGTCAAAACAAGATTGAAGGTCCCATTGGAAGTATCACTTCTGTCACTCTAAGGAAACTTAATGTATCTTCGAACAAATTGTCGGGTGCCTTGCCTCTCAAGATAGGCCACTGCGCCATCGTAGATTTGAGTAATAACATGCTGTCCGGTAATTTGTCGAGGATCCAGTATTGGGGTAACTATGTGGAAGTCATTCAGCTAAGTTCAAACTCATTGGTAGGTACACTGCCAAATGAAACTACTCAGTTCTTAAGGTTAACCGAACTTAAGGTATCCAATAACTCATTGGAGGGAGTTCTATCACCAATCTTGGGAACATATCCAGAGCTAAGAGAGATTGATCTTAGTCTCAACCGGCTTTCGGGCTTCCTCCTACCGAGCTTTTTCACCTCGACCAAGTTGACTAAGCTTAACCTTTCCAACAATAAGTTTTCTGGACCCATTCCTGTTGAACTTCGACAAGGTCGAAATAATCCATCAGTTTCTTCTAAAAATTCTAGTATGGTATATCTTGATCTTTCATGCAACAACTTGAGTGGGGTTATACCTTCAAAATTAAGCAAGCTTCACAATTTGGCTTATCTCAATCTATGTAGCAACAAATTGGAAGGTACTATTCCTAATGACCTTCCGGCGTTGCAAGGTTTTAATGTGTCCTTCAATAATCTCTCAGGTGTTGTGCCAGACAACTTAATGCAGTTTCCTGAATCATCATTTCATCCGGGAAACTCTCTGCTGAAATCACGATCATCCCCAAAAGATGCTTCTGACTTTGGTTTGGGAGAACATCAGTCACATAAAAAATCTGCAATTAGGATTGCTTTGATTGCAAGTTTGGTGACCGGCGCTCTTGTGATGGCCTTTGTTGGTATGGTGATTTATTACATGGTTCGCTGGCAAAAAGAAAGGACTTCGAAACAAAATGAAGCAAGAGGTATGGTCCAAGTGAGTTCTTCATTATCAACCAGAGAGGGACCTAACAGAAATTTGGAGGCAATAGGATCTTCTAAGGGTGGATCAGCTGATGATGGAGGAAACATCGATGCCTTGACAAAGAAGGCAAAAGATCTTTGCCAACCTGAATTAGTTAAGAACGACGAGGACATGCTTTCTCCAATGTCTTTTGTGTCAGCCTCAAATCCTTCATCTTCTATAAGTCCTCAGTTTGAGAATCCCGGTTCCCTCAGTGTATCCTCTCCAGATAAACTAGGCGGGTACTTGAATCTATTTGATGGATCTTTGGTGTTAACTGGTGAGGAACTTTCGTGTGCTCCGGCGGAAATTATTGGTAGGAGTTGTCATGGAACACTATATAAAGCCACACTTGACTCTGGTCATGAATTAGCTGTAAAATGGTTAAGGGAAGGCATCACTAAAGGGAAGAAGGAGTTTGCGAGGGAAGTTAGGAAACTCGGGACTATCAAGCATCCGAATCTGGTTTCTATACAGGGTTACTACTTGGGACCAAAGGAGCATGAGAGACTGATTGTAACAAATTTTATTAATGCACATTCTTTGGACATTTATCTCCATGAGGCAGATAAAAGAAATCTCCAATCTCTGTCTCTTGATGAGAGGCTGAGAGTGGCCGTCGAAGTCGCATGGTGTTTGAATTTCCTACACAATGAGAAGGCCATACCTCATGGCAATCTCAAATCCACAAACATTCTACTTGAAGCTCCAGACCGGAACGTTCGGCTCACTGACTACAGCCTGCACCGGATACTAACTGCTGCAGGCACGGCCGAGCAAGTCTTGAACGCCGGTGCTCTTGGTTACATGCCTCCCGAGTTTGCCAGATCATCAAGCAAACCATCCCCTTCACTAAAGAGTGATGTGTATGCATTTGGAGTAGTCTTGTTAGAGCTCACGACAGGGCGAAAATCGGGTGAAATATTGTCCCAGATTCCAGGAGCGGTCGACCTGACCGATTGGGTGAGGTTCTTAGCCAGCGAAAACCGGTCTAATGAATGCTTTGACAGGTTCCTTGTGGAACAAGAAAGAAGTGAAAGAGCATCTAGAATCCTTGATGAAATGCTTAAGGTTGCTCTTACATGCATTCTTCCAGCATCAGAGAGGCCTGATATGGAAACAGTTTTTGCTGATCTTTCATCAATAAGGTAG 3006 0.4208 MQGMWLMLFLLVAIAFGNSDIDALLELKKGFRDDPAGLVLDSWNSKSLDSNGCPQNWYGILCGEGSVTSIILDNAGLVGEFNFPAIGGLKMLRNLSVSNNQFEGSILQIGQLELLEFLDLSLNKFNGLLPSNFVELRNLVYLNLSSNEFEGTLPVGFDKLSKLKYLDLNTNNFSGDIMHIFSQMGSVVHVDLSRNRFSGTPDFGLGDDSFLSSIKYLNVSHNSLTGELFAHDGMPYLDSLEVFDASNNKLEGNIPSFTFVVSLRILRLERNQLSGLLPQTLLKESSMMLSELDLSQNKIEGPIGSITSVTLRKLNVSSNKLSGALPLKIGHCAIVDLSNNMLSGNLSRIQYWGNYVEVIQLSSNSLVGTLPNETTQFLRLTELKVSNNSLEGVLSPILGTYPELREIDLSLNRLSGFLLPSFFTSTKLTKLNLSNNKFSGPIPVELRQGRNNPSVSSKNSSMVYLDLSCNNLSGVIPSKLSKLHNLAYLNLCSNKLEGTIPNDLPALQGFNVSFNNLSGVVPDNLMQFPESSFHPGNSLLKSRSSPKDASDFGLGEHQSHKKSAIRIALIASLVTGALVMAFVGMVIYYMVRWQKERTSKQNEARGMVQVSSSLSTREGPNRNLEAIGSSKGGSADDGGNIDALTKKAKDLCQPELVKNDEDMLSPMSFVSASNPSSSISPQFENPGSLSVSSPDKLGGYLNLFDGSLVLTGEELSCAPAEIIGRSCHGTLYKATLDSGHELAVKWLREGITKGKKEFAREVRKLGTIKHPNLVSIQGYYLGPKEHERLIVTNFINAHSLDIYLHEADKRNLQSLSLDERLRVAVEVAWCLNFLHNEKAIPHGNLKSTNILLEAPDRNVRLTDYSLHRILTAAGTAEQVLNAGALGYMPPEFARSSSKPSPSLKSDVYAFGVVLLELTTGRKSGEILSQIPGAVDLTDWVRFLASENRSNECFDRFLVEQERSERASRILDEMLKVALTCILPASERPDMETVFADLSSIR 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00543 1001 Pfam Protein tyrosine and serine/threonine kinase 721 996 IPR001245 GO:0004672|GO:0006468
Adu07g00543 1001 Gene3D Phosphorylase Kinase; domain 1 717 794 - -
Adu07g00543 1001 Gene3D Transferase(Phosphotransferase) domain 1 796 1001 - -
Adu07g00543 1001 MobiDBLite consensus disorder prediction 603 623 - -
Adu07g00543 1001 Pfam Leucine rich repeat N-terminal domain 18 62 IPR013210 -
Adu07g00543 1001 PANTHER OS07G0626500 PROTEIN 1 1000 - -
Adu07g00543 1001 SUPERFAMILY Protein kinase-like (PK-like) 721 997 IPR011009 -
Adu07g00543 1001 MobiDBLite consensus disorder prediction 536 555 - -
Adu07g00543 1001 SMART LRR_typ_2 483 507 IPR003591 -
Adu07g00543 1001 SMART LRR_typ_2 260 283 IPR003591 -
Adu07g00543 1001 SMART LRR_typ_2 211 231 IPR003591 -
Adu07g00543 1001 SMART LRR_typ_2 184 207 IPR003591 -
Adu07g00543 1001 SMART LRR_typ_2 136 159 IPR003591 -
Adu07g00543 1001 SUPERFAMILY L domain-like 237 531 - -
Adu07g00543 1001 SUPERFAMILY L domain-like 21 301 - -
Adu07g00543 1001 Gene3D Ribonuclease Inhibitor 207 549 IPR032675 -
Adu07g00543 1001 MobiDBLite consensus disorder prediction 602 636 - -
Adu07g00543 1001 Pfam Leucine Rich repeat 425 440 IPR001611 GO:0005515
Adu07g00543 1001 Pfam Leucine Rich repeat 458 475 IPR001611 GO:0005515
Adu07g00543 1001 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 1000 - -
Adu07g00543 1001 Gene3D Ribonuclease Inhibitor 17 202 IPR032675 -
Adu07g00543 1001 ProSiteProfiles Protein kinase domain profile. 717 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00543 Adu-Chr7 5672132 5675845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00543 127 534 Receptor kinase-like Gene Family AT5G07280 28.486 4.74e-33 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Adu07g00543 PK_Tyr_Ser-Thr 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00543 - - ccaj:109792420 1442.56