Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00531 ATGAGATCTCATCCTGGAAGAGAATGGAAGGGTATTCACCCTCCAAATGATGATGATAACGGTTTAATGGAACCTGTGGCGGTTTCACCAATACCATCATCATCATCACCTTCTATTGATATATCAAAATTCGAGAAGAACACAAAGTTGATAGTAAGACTCAAGACTCGTCCTCAACACGAAGAAGATAATGTCGTCGGCGATGATGGATCCTCAGCCGAGAAAGGATTTCAATGCAACATTTGTGACGAGTATTTTGCAACAATTCAATCTTTAAGAGGACATAGGTCAAACCACAACAAAGAGAAGAAAAGCAAGAGTCACAAGAATGATGGTGATGATAATGAACAAATAAGGAATATTACAGAAGAATCAAGTGAACCTAGTTCAAAAATTCTTAGAGAGTTTGATTTGAATGAGCTACCTGAGAATAATAATAATATAGATGGAGGAAGTTAG 459 0.3704 MRSHPGREWKGIHPPNDDDNGLMEPVAVSPIPSSSSPSIDISKFEKNTKLIVRLKTRPQHEEDNVVGDDGSSAEKGFQCNICDEYFATIQSLRGHRSNHNKEKKSKSHKNDGDDNEQIRNITEESSEPSSKILREFDLNELPENNNNIDGGS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00531 152 MobiDBLite consensus disorder prediction 1 40 - -
Adu07g00531 152 MobiDBLite consensus disorder prediction 104 121 - -
Adu07g00531 152 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY 1 39 - -
Adu07g00531 152 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY 73 144 - -
Adu07g00531 152 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 1 39 IPR044653 GO:0003700
Adu07g00531 152 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 73 144 IPR044653 GO:0003700
Adu07g00531 152 MobiDBLite consensus disorder prediction 93 152 - -
Adu07g00531 152 MobiDBLite consensus disorder prediction 1 17 - -
Adu07g00531 152 Pfam C2H2-type zinc finger 77 101 - -
Adu07g00531 152 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Adu07g00531 152 Gene3D Classic Zinc Finger 54 135 - -
Adu07g00531 152 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Adu07g00531 152 SUPERFAMILY beta-beta-alpha zinc fingers 74 104 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00531 Adu-Chr7 5467966 5468657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00531 1 114 C2H2 Transcription Factor Family AT4G35280 28.571 2.58e-07 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu07g00531 zf-C2H2_6 4.4e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00531 - K10503 adu:110273500 278.485