LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu07g00516	ATGTTACCTATTCCATCTCGCTTTTGCTCAATCTTGATCTCGCTCTCGCTCGATTCTCGATCTCGCTCTCGCTCGATTCTCGATGGAGCCAGCAAGTTCGACTTCACCGTGCAGAATGACGGTGATCAAGTCACGCTCAAGACCAAGATTGTTACTGCCGAGATTATTGGCACGCTCATTGACGAAGACCCACTCGCGATCTACACCATTGATAAGGTTCTGCTTCCCAGGGAACTTTTCAAGGTCCTGGCTCCGGCTCCTTCACCCTCGCCCACACCGGAGTCAGCCGCCGCGGACGCTCCTGCATCCCCGAAGAAAGAGGGAAAGAAGAAGAAGCAAAAGGTAGCCGACGCGCTGGCAGATGAGGAATCAGTGCCTGCAGATTCACGCAGTGATGCCGCCGATGACAGCACTAACGACGGTAATGGCGCTGTTAGGTTTGACGGCGTCAGGTACGCTGGTATTAGTAACGAAGGCGTCAAGAGTGGTTGCCTTCGTAGCTGCGCAGCCTTTATGGATACTTTTTTCGCAGCTCAAGTTGCTTCTTATATTCTCTACGGCATTCTACAGGCCCAGCTTCTTCTGAGAAGTTCGGCAGCAAGGAAGTCTATTCCCTTGGATTCTATTTGGATTCCTTACCACCGGGGATTCCCCTATCCTCACTGTAGGAACATACTGAGGCTAAAGAGAAAGCAAAGACAATTTTGCTTCTGTCCCGTTGATGATATTATAGAGAATACAGATGGTTTTGCTGGTGTCTTTCCTAAGCACAAATATGATATTGTGACGAGGTTACAAGCTAGAAATCACGTTTGTGGGATGATTGGTGATGGAGTGAATGATGCACCAGCTTTGAAGATAGCCGACATAGGTATCGCTGTAGCAGATGCCACAGACGGTGCAAGAAGTGCCTCTGACATAGTTCTAACAGAACCTGGGTTGAATGTGATCATAAGTGCTGTTTTAACTAGCCGTGCAATTTTCCAAAGAATGAAAAACTACACAGTAATCCCCCAACAATAA	1023	0.4819	MLPIPSRFCSILISLSLDSRSRSRSILDGASKFDFTVQNDGDQVTLKTKIVTAEIIGTLIDEDPLAIYTIDKVLLPRELFKVLAPAPSPSPTPESAAADAPASPKKEGKKKKQKVADALADEESVPADSRSDAADDSTNDGNGAVRFDGVRYAGISNEGVKSGCLRSCAAFMDTFFAAQVASYILYGILQAQLLLRSSAARKSIPLDSIWIPYHRGFPYPHCRNILRLKRKQRQFCFCPVDDIIENTDGFAGVFPKHKYDIVTRLQARNHVCGMIGDGVNDAPALKIADIGIAVADATDGARSASDIVLTEPGLNVIISAVLTSRAIFQRMKNYTVIPQQ	340

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu07g00516	340	Gene3D	-	238	312	IPR023214	-
	Adu07g00516	340	PRINTS	P-type cation-transporting ATPase superfamily signature	298	310	-	-
	Adu07g00516	340	PRINTS	P-type cation-transporting ATPase superfamily signature	275	294	-	-
	Adu07g00516	340	TIGRFAM	ATPase_P-type: HAD ATPase, P-type, family IC	248	335	IPR001757	GO:0005215\|GO:0005524\|GO:0016021\|GO:0016887
	Adu07g00516	340	PANTHER	PLASMA MEMBRANE ATPASE	229	336	-	-
	Adu07g00516	340	MobiDBLite	consensus disorder prediction	86	142	-	-
	Adu07g00516	340	SUPERFAMILY	HAD-like	228	322	IPR036412	-
	Adu07g00516	340	PANTHER	CALCIUM-TRANSPORTING ATPASE	229	336	-	-
	Adu07g00516	340	PRINTS	H+-transporting ATPase (proton pump) signature	306	331	IPR001757	GO:0005215\|GO:0005524\|GO:0016021\|GO:0016887
	Adu07g00516	340	PRINTS	H+-transporting ATPase (proton pump) signature	247	263	IPR001757	GO:0005215\|GO:0005524\|GO:0016021\|GO:0016887

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu07g00516	Adu-Chr7	5285832	5288749	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu07g00516	229	336	Primary Pumps ATPases	AT5G62670	78.704	6.90e-51	179

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu07g00516	K01535		-	ahf:112742714	189.504

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