Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00509 ATGAATGGATCAGCATCATCATCATCATCACCTTCAAAGAAGATAAAGGTAGAAAAAACAGAAGATACAAATGAAAAACCAGTTACACCACCCATGCGTGAGTGTGAGTTTTGTGGGAAGAAATTCAGCTCCGGAAAAGCTCTTGGCGGCCATAAAAGATTCCACCTTCAACTTCTAAGAAAAGAGAGAGAATCCGCCAACAAGTTGGCGGTTACTAGTGATCATTATGGCGGCGGCGACGACAGAGGCAGCAACATAAAGTTACTATCCTCTTTGGATTCTCCTAACAAGAAGCTACTTTGTTATCTTTGCAACAAGGAGTTTTTATCAGAGAAGTCGTTATTCGGCCACATGAGATCTCATCCTGGAAGAGAATGGAAGGGTATTCACCCTCCAAATGATGATGATAATGGCTTGATGGAACCTGTGGCGGTTTCACCAATAACATCATCATCATCACCTTCGATTGATATATCAAAATCGTTGCCCCCATCTTGGTTGAAGACCGGAATTCGAGGTAAGAAAGGCATTTTCGATGAAATTCTTGAAGGTGTTGTTGCTGTTATGGATGACAAATCCCATGAGAATAATAAGAGTAGTTTCGATCTACAAAATAGGGGAAAAATTGAGCATGATTATGGTGATAGAGAAAAAGAAAAAGAGGGTGATTTGGTCAAAGAAGGGTGTAATTTGAAGAAAAGGAAAAGAATATTATCTAACAATATGAACGATGAAACTACAACTAATAAGAAGAACACAAAGTTGATAGTAAGACTCAAGACTCGTCCTCAATACGAAGAAGATAATGTCGCCGAGGATGAGAAAGGATTTCAATGCAACATTTGTGACGAGTATTTTGCAACAATTCAATCTCTAAGAGGACATAGGTCAAACCACAACAAAGAGAAGAAAAGCAAGAGTCACAAGGATGATGGTGATGATAATGAACAAATAAGGTATTTAGAGAATACTACAGAAGAATCAAGTGAACCTAGTTCAAAAATTCTTAGAGAGTTTGATTTGAATGAGCTACCTGAGAATAATAATATAGAAGATGGAGGAAGTTAA 1068 0.3792 MNGSASSSSSPSKKIKVEKTEDTNEKPVTPPMRECEFCGKKFSSGKALGGHKRFHLQLLRKERESANKLAVTSDHYGGGDDRGSNIKLLSSLDSPNKKLLCYLCNKEFLSEKSLFGHMRSHPGREWKGIHPPNDDDNGLMEPVAVSPITSSSSPSIDISKSLPPSWLKTGIRGKKGIFDEILEGVVAVMDDKSHENNKSSFDLQNRGKIEHDYGDREKEKEGDLVKEGCNLKKRKRILSNNMNDETTTNKKNTKLIVRLKTRPQYEEDNVAEDEKGFQCNICDEYFATIQSLRGHRSNHNKEKKSKSHKDDGDDNEQIRYLENTTEESSEPSSKILREFDLNELPENNNIEDGGS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00509 355 MobiDBLite consensus disorder prediction 14 29 - -
Adu07g00509 355 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 11 347 IPR044653 GO:0003700
Adu07g00509 355 MobiDBLite consensus disorder prediction 1 30 - -
Adu07g00509 355 Pfam C2H2-type zinc finger 101 122 - -
Adu07g00509 355 Pfam C2H2-type zinc finger 277 301 - -
Adu07g00509 355 Pfam C2H2-type zinc finger 34 56 - -
Adu07g00509 355 Gene3D Classic Zinc Finger 256 334 - -
Adu07g00509 355 SUPERFAMILY beta-beta-alpha zinc fingers 98 299 IPR036236 -
Adu07g00509 355 MobiDBLite consensus disorder prediction 293 355 - -
Adu07g00509 355 ProSiteProfiles Zinc finger C2H2 type domain profile. 277 304 IPR013087 -
Adu07g00509 355 Gene3D Classic Zinc Finger 5 124 - -
Adu07g00509 355 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 55 IPR013087 -
Adu07g00509 355 MobiDBLite consensus disorder prediction 304 323 - -
Adu07g00509 355 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 126 IPR013087 -
Adu07g00509 355 ProSitePatterns Zinc finger C2H2 type domain signature. 279 299 IPR013087 -
Adu07g00509 355 SMART c2h2final6 277 299 IPR013087 -
Adu07g00509 355 SMART c2h2final6 33 55 IPR013087 -
Adu07g00509 355 SMART c2h2final6 99 121 IPR013087 -
Adu07g00509 355 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY 11 347 - -
Adu07g00509 355 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Adu07g00509 355 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00509 Adu-Chr7 5187428 5188495 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00509 35 132 C2H2 Transcription Factor Family AT2G26940 37.398 2.03e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu07g00509 zf-C2H2_6 1.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00509 - - adu:107496635 685.256