Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00507 ATGGCTGTTACCTTCTCAGATCTGCACACAGAGTCTGGTCTCAAAACCCTAGAGGAGTTCCTCTCTGGGAAGACCTATGTTTCTGGGGATCAATTGACAAAAGATGATATCAAAGTGTATGGTTTTGTTTCGGAGAAGCCAGGTAGCTCTTTTCCCAGTGCTGCCAAGTGGTACGATGTTGTCTCTTCCCATCTTGCCGCAAGTTTTCCTGGCAAAGCTCAAGGTGTGAAATTTGCTGGCCAAGGTGCTCCAGCTGAAGCTGCACCTGCCAAAGCGGCGGCGGCTGCTGCTGCTGATGACGACGATCTTGATCTCTTCGGTGATGAGACAGAGGAGGATAAGAAGGCAGCTGAGGAAAGGGAGGCTGCAAAGAAGACCACAAAGAAGAAAGAAAGTGGAAAGTCATCCGTTTTGCTTGATGTTAAGCCTTGGGATGACGAAACAGACATGAAGAAGCTGGAAGAGGCTGTTCGAAGCATTCAGATGGAGGGTCTACTCTGGGGAGCATCCAAACTGGTTCCCGTTGGATACGGCATCAAGAAGCTACAGATCATGATGACGATTGTTGATGACCTTGTGTCTGTCGACTCCCTCATCGAGGAGCATCTCACTGTCGAGCCATGCAACGACTCAGAAATTTGGCCTTCTAAGCTTCAATTTCCTTTGAAGGGAAGTGAAATCCGGTGCAGAATTGGAGGCTTTAGTCAAAGAGAAAGAATGTCAAGTGGAGCAACGCACTGGTGTTACGAATGCAGGCAGCCAATCGTGCTCGGAGGGAGGGATGTTGTTTGTCCCTACTGTGATGGAGGGTTCGTTCAAGAACTTAATGAATTGCAAGGATTTGCGCCTCAACATGCCTTTCCATCATCACAGATGGGGGAGTTTCATCAGATGCCTGATTTTTTCGATGCTTTGCATGCTTTTATGGGGCGGAGGGGTCCTGATCCAAGGTTTGGTTTTATAGATGCTGTGGATAATTTCATGAGGCAGAGAATGGCTGGAAGGCACCCCAATTTTGATGTTAGAGGGAGGTCTGGTCCTGCCCCGGGTCCTGAACAGAGTTGGGGTGTTGTTAGTTCTGGTCCTTATTTGATCTTTCACGGTCAAGTTCCTGGATTCACCTTGGCTAATGGTGGCAGTCCAAGAGGTGGTCCGAGGGGTGTTGATTTCGGTGATTACTTTATGGGCCCTGGACTTGAAGAACTTATTGAGCAACTCACCATGAATGAACGGCGTGGTCCACCCCCAGCTGCACGTTCTTCAATTGACGCAATGCCTACTATTAAGATCACGAGTGCGCATCTTCGCCAAGATTCACACTGTCCCGTGTGTAAAGAGAAATTTGAACTGGGATCTGAAGCCAGAGAGATGCCATGTAACCATATTTACCACACTGATTGTATTGTTCCTTGGTTGGTTCAGCATAACTCGTGTCCTGTTTGCCGTGTTGAACTTCCACCTCAAGGACATGTTAGTTCTCGTGGTAGTCGAAGTGGGGGTGGAAGGAACGCCAATAGTAGTGGTGACAGCGACAGCAGCTCCAGGAGCAGGGAGAGCAGCCATCAGAGCCAAGGAAGGAGACATCCTCTATCATTTCTGTGGCCGTTCCGTTCTTCCAGTTAA 1623 0.4874 MAVTFSDLHTESGLKTLEEFLSGKTYVSGDQLTKDDIKVYGFVSEKPGSSFPSAAKWYDVVSSHLAASFPGKAQGVKFAGQGAPAEAAPAKAAAAAAADDDDLDLFGDETEEDKKAAEEREAAKKTTKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIQMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEEHLTVEPCNDSEIWPSKLQFPLKGSEIRCRIGGFSQRERMSSGATHWCYECRQPIVLGGRDVVCPYCDGGFVQELNELQGFAPQHAFPSSQMGEFHQMPDFFDALHAFMGRRGPDPRFGFIDAVDNFMRQRMAGRHPNFDVRGRSGPAPGPEQSWGVVSSGPYLIFHGQVPGFTLANGGSPRGGPRGVDFGDYFMGPGLEELIEQLTMNERRGPPPAARSSIDAMPTIKITSAHLRQDSHCPVCKEKFELGSEAREMPCNHIYHTDCIVPWLVQHNSCPVCRVELPPQGHVSSRGSRSGGGRNANSSGDSDSSSRSRESSHQSQGRRHPLSFLWPFRSSS 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00507 540 ProSiteProfiles Zinc finger RING-type profile. 441 482 IPR001841 -
Adu07g00507 540 MobiDBLite consensus disorder prediction 491 513 - -
Adu07g00507 540 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 99 107 IPR001326 GO:0003746|GO:0005853|GO:0006414
Adu07g00507 540 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 404 488 IPR013083 -
Adu07g00507 540 Pfam EF-1 guanine nucleotide exchange domain 136 206 IPR014038 GO:0003746|GO:0006414
Adu07g00507 540 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 240 540 - -
Adu07g00507 540 Pfam Ring finger domain 440 482 IPR001841 -
Adu07g00507 540 SUPERFAMILY GST C-terminal domain-like 10 64 IPR036282 -
Adu07g00507 540 MobiDBLite consensus disorder prediction 489 540 - -
Adu07g00507 540 Pfam zinc-ribbon 245 275 IPR039525 GO:0061630
Adu07g00507 540 CDD EF1B 132 201 IPR014038 GO:0003746|GO:0006414
Adu07g00507 540 SUPERFAMILY RING/U-box 421 488 - -
Adu07g00507 540 SMART ring_2 441 481 IPR001841 -
Adu07g00507 540 SUPERFAMILY eEF-1beta-like 131 213 IPR036219 -
Adu07g00507 540 SMART EF1_GNE_2 134 278 IPR014038 GO:0003746|GO:0006414
Adu07g00507 540 CDD RING-H2_RNF126_like 441 482 - -
Adu07g00507 540 PANTHER OS03G0351800 PROTEIN 240 540 - -
Adu07g00507 540 Gene3D - 127 212 IPR014717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00507 Adu-Chr7 5155020 5164551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00507 1 210 Eukaryotic Initiation Factors Gene Family AT5G12110 74.884 1.52e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00507 K11982 - gmx:100813674 484.182