Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00503 ATGAGGAAGAAACTGGATACACGTTTCCCTGCGGCTAGGATTAAGAAAATCATGCAAGCTGATGAGGATGTAGGGAAGATTGCTATGGCTGTGCCTCTTCTAGTTTCTAAAGCATTAGAGCTATTCCTGCAAGATTTGTGTAATAGGACATATGATATAACTCTTAGGAGAGGGGCAAAGACCATGACTGCTTTGCATTTAAAGCATTGTGTCCAGACATTTAATGTGTTTGATTTTCTGAAAGATATTCTCAACAAGGTTCCTGATTTAGGTGGTTCTGGTGCGACGGGTGATGATCGTTCTATCCCTAAGAGGAGGAAAGTTGCGGAAGGTGATGATAATGACAGTGATGAGGAGCAAAAGAGAAATAAGATGCTAGAGGCCAGAAATACTAGTGGCAGAGGAAGGGGTAGGGGGAGAGGTAGAGGTCGTGGCCGAGGACAGAGAACAGCAGATCATGATCATGAAATGATTTCACATGTCAAGTTTGAAGATGAATCTGATGTATTGAAGCAAAATGGCAAGCACACACATAGCAGTGAAAGCCCGGAAAATGTGTTGGAACATGAAGAAGTTAAGCCGAGTTTGTCAGTTAGCAGGCCAGCCGAAGCGTGTGTAAGGAATATCGACTTAAATATGGCTCCAGTTGATGAGGATATGGATTCATTCGACACACAAGCTCCAGTCCCAGTAATGGCTTCATCGGACACACAAGCTCCAGTCCCAGTAATGGATTCATCAGACGCACCAACTCCTGTTCCGGTTACCTCTTCTGCAAAACAAACAGTAGAAGAGAAGCACGAGGAATACCCTGGATGGTCCTTTTCGGACATGGAAAAAATGAGCATCGACACCATTCAGTTGGCGAACATAAACGGAAGGATAGATGAAGACGACGAAGATTATGACGAAGAAACATAG 921 0.4387 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCNRTYDITLRRGAKTMTALHLKHCVQTFNVFDFLKDILNKVPDLGGSGATGDDRSIPKRRKVAEGDDNDSDEEQKRNKMLEARNTSGRGRGRGRGRGRGRGQRTADHDHEMISHVKFEDESDVLKQNGKHTHSSESPENVLEHEEVKPSLSVSRPAEACVRNIDLNMAPVDEDMDSFDTQAPVPVMASSDTQAPVPVMDSSDAPTPVPVTSSAKQTVEEKHEEYPGWSFSDMEKMSIDTIQLANINGRIDEDDEDYDEET 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00503 306 MobiDBLite consensus disorder prediction 99 134 - -
Adu07g00503 306 MobiDBLite consensus disorder prediction 145 196 - -
Adu07g00503 306 MobiDBLite consensus disorder prediction 245 260 - -
Adu07g00503 306 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Adu07g00503 306 SUPERFAMILY Histone-fold 3 88 IPR009072 GO:0046982
Adu07g00503 306 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Adu07g00503 306 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 305 - -
Adu07g00503 306 MobiDBLite consensus disorder prediction 90 199 - -
Adu07g00503 306 MobiDBLite consensus disorder prediction 245 275 - -
Adu07g00503 306 PANTHER HISTONE SUPERFAMILY PROTEIN 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00503 Adu-Chr7 5116080 5118703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00503 1 127 CCAAT-HAP5 Transcription Factor Family AT3G12480 69.925 3.55e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Adu07g00503 CBFD_NFYB_HMF 6.5e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00503 K21752 - gmx:100814800 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00503 07 5116080 5118703 Adu07g00503 07 5116080 5118703 ECH