Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00482 ATGATGATGATGATGGATTCATCATCACAAAAGAAGTTACCATCATCATCATCATCAGTGCCAGCACCATTCCTGACAAAGACATACCAACTAGTTGATGATCCTATGACTGACCACATAGTGTCATGGGGTCATGATGGTCATTCCACATCATCATCATTTGTTGTTTGGAGACCTCCTGAGTTTGCCAGAGACCTTCTTCCCAACTATTTCAAACACAACAACTTCTCCAGCTTTGTTAGGCAACTCAATACCTATGGATTCAAGAAGGTAGTTGCTGATAGATGGGAATTTGCAAATGAGTATTTCAGAAAAGGAGCAAAACATCTTCTATGTGAAATCCATAGAAGAAAAACCCCTCATCATCATCACCATCATCATCATCATCATCAAGAGAATAATAATGAAGCTCTATGTTGGATTGATTCTTCTACAACTCCTACTACTATTCCTTCTATTCCTACTTCATTATTACTACCTTCTCCTAAATCACCATCATCTTCTTCATTAGGAGGAGCCACTAATAATAGTGATCATCATCAACATAATCATATCTTAGCAGCACTTTCTGAGGATAATCAAAGGCTAAGGAGAAAGAACTTGATGCTATTATCTGAACTAACTCACATGAAGAATCTCTACAATGATATCATATACTTCATCCAAAACCATCTCAAACCTGCTTCTTCTCCCTTTCATCATAATCAAACAACTATTCCAAAGCTTGTGGAGTTGGATTATTCATCACCAAAGGGGAGTAGAATGATGATGAGTATTAGTGACGATCATGTTGATGATGATGATGATGATGATGATGATTTCAATAATAATAATTGTAGTTCTTCTTCAGTGAAGCTCTTTGGTGTTCCTCTTAGTGGTAAAAAGAGATTACACCCAGATAATATTTTTCAACAAGATTAA 921 0.3626 MMMMMDSSSQKKLPSSSSSVPAPFLTKTYQLVDDPMTDHIVSWGHDGHSTSSSFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVADRWEFANEYFRKGAKHLLCEIHRRKTPHHHHHHHHHHQENNNEALCWIDSSTTPTTIPSIPTSLLLPSPKSPSSSSLGGATNNSDHHQHNHILAALSEDNQRLRRKNLMLLSELTHMKNLYNDIIYFIQNHLKPASSPFHHNQTTIPKLVELDYSSPKGSRMMMSISDDHVDDDDDDDDDFNNNNCSSSSVKLFGVPLSGKKRLHPDNIFQQD 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00482 306 Pfam HSF-type DNA-binding 24 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu07g00482 306 MobiDBLite consensus disorder prediction 253 279 - -
Adu07g00482 306 MobiDBLite consensus disorder prediction 152 179 - -
Adu07g00482 306 Coils Coil 186 206 - -
Adu07g00482 306 Gene3D - 16 119 IPR036388 -
Adu07g00482 306 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 4 297 IPR027725 -
Adu07g00482 306 SUPERFAMILY "Winged helix" DNA-binding domain 21 117 IPR036390 -
Adu07g00482 306 PRINTS Heat shock factor (HSF) domain signature 24 47 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu07g00482 306 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu07g00482 306 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-4D 4 297 - -
Adu07g00482 306 ProSitePatterns HSF-type DNA-binding domain signature. 67 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu07g00482 306 SMART hsfneu3 20 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00482 Adu-Chr7 4770394 4771537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00482 1 298 HSF AT1G46264 44.669 1.17e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Adu07g00482 HSF_DNA-bind 9.9e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00482 K09419 - gmx:100527682 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00482 07 4770394 4771537 Adu07g00482 07 4770394 4771537 ECH