Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu07g00478 | atgCCCAACCCAGAAAAAAAGGCCAACAAAGCAGCCATAAGTCTCAGGAAGGGTAACACCCGTCTTCCGCCGGAAGTGAACCGCGTCCTCTACGTCCGAAACCTACCTTTCAACATCACCAGCGAAGAGATGTACGACATTTTCGGAAAATACGGCGCCATTCGCCAGATCCGAATCGGCACTAACAAGGACACTCGCGGCACCGCCTTCGTCGTCTACGAGGATATCTACGACGCCAAGACCGCCGTCGACCACCTCTCCGGTTTCAACGTTGCGAATCGGTACCTTATTGTTCTGTATTACCAGCAAGCGAAGATGAGCAAGAAGTTCGATCAGAAGAAGAAGGAGGATGAGATTACGAAGATGCAGGAGAAGTACGGTGTCTCCACCAAAGATAAGGCTCAAGTGATTCTGGTTTAA | 420 | 0.5024 | MPNPEKKANKAAISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEITKMQEKYGVSTKDKAQVILV | 139 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu07g00478 | 139 | PANTHER | SPLICING FACTOR 3B SUBUNIT 6 | 15 | 125 | - | - | |
Adu07g00478 | 139 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 28 | 103 | IPR000504 | GO:0003723 | |
Adu07g00478 | 139 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 30 | 96 | IPR000504 | GO:0003723 | |
Adu07g00478 | 139 | PANTHER | SPLICING FACTOR 3B | 15 | 125 | - | - | |
Adu07g00478 | 139 | Gene3D | - | 2 | 117 | IPR012677 | - | |
Adu07g00478 | 139 | SUPERFAMILY | RNA-binding domain, RBD | 9 | 111 | IPR035979 | GO:0003676 | |
Adu07g00478 | 139 | SMART | rrm1_1 | 29 | 99 | IPR000504 | GO:0003723 | |
Adu07g00478 | 139 | CDD | RRM_SF3B14 | 26 | 102 | IPR034150 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu07g00478 | Adu-Chr7 | 4721517 | 4723348 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu07g00478 | 30 | 122 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 31.579 | 2.65e-07 | 46.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu07g00478 | K12833 | - | gmx:100802877 | 244.588 |