Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00457 ATGGAAGAATCAGGAGAATTGCAATCAGATGAAAATAAAGCTTCTACAGAGAAAAAAAATAAAAGAAGACTCAAGACACCTTCCCAGGTTATGGCCTTGGAGAAATTTTATAACGAGCACAAATATCCCACGGAGGAAATGAAACAAGATCTTGCTGAGGAGCTAGGGTTGACGGAGAAGCAAATTTCTGGATGGTTTTGCCACAGAAGGTTAAAAGATAAACGGTTGTTGAAAGATGAAGCGATTGGTAATGGACGACAAGATCGTTCAAGTGGTGTCATCCAGGACCGTGGTAGTGGACGGCAAGATTCATGCGGAAGCAGCAAACATGGTGATTACCGTTATGTGGATCCGAAAGAGGTAGAAAGTCATGGCCTGTACAATCGTGATTTGTCAGTTCCGGATATGACCTACGGACATAGGAACCAGTATGCAGAAAACGCAAGCGAAATGGATGATACATCATCTGATAGTGGCTCATTTTTGCAAGATCGCATGTTTCCTCAAGGCCAGGATCCATACGATGTGGATCCTTCAAGGTATCCGACTCACAATGGAGCTCTTCCTCCCCTTAATCCCAAGGGTGGAAACATAGGATATAAACCATCAGGATATTTGAAAGTCAAGGGCGAGATAGAACATGCTGCTATAACTGCCGTAAAGAAGCAATTAGGGAGGCATTATCAAGAAGATGGTCCACTCCTTGGTATAGAATTTGATCAGCTTCCCCCAGGGGCATTTGAAGGCCAAACTGCAGATCCAGTTCATGAACCGTACACCATTGCAAATCCTGCACTTCTTACTTCCCCAGAAGTCTCCACTGGAAAAAGGCAATCCAACATTAGCACAAAATATGTTTCTTATGCTAAATTTAGTTCCAAAGATTCACATGAAGGGGTTGAATTTGGCTCGTTGCATGACTCTGATTTACCGGATAAGCAGGATAAGAAGGCCCGCCAGAGTATTAAACAGAGGCAACCCATTTATGGTTACGCCAACCATCTTCCTGGCCGGAACTCCTCGGATTTGTATGATGACTCTAACGGAGAAGCATCTGCTTATACTAAAGTTCGTAGTATCGTCTCGAAGCATGGTATTGAGGGGATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTATGAAGAGAACCCCATGGTTAAGCAGACAGATTTGATGCAAGGCTATGATAACATCAATCCAAAAAATGTGAAAAGAAGTGAACATGTTAAGCCCAAGCCCGCAAATTCAATCCGTCATCCTCGAATGCCTGTGGATGCTGAAGAAAGGGGGCTACAACCTATGAGGGTGGCAAAGGAAGAGTTGCATAAGGGGGAGAGGAAAGTGAAAAAGTATCACGATTCTTATGGAGCAAGGATGCTTCCAAATGAAATCACGGTGAGTGTAAGACGGGCTGCGAAACGAGCAAAAGTTGATCTGCATAAACAATTCAATCCAAAACAAGCACCTATTGCTGAGATAGAACAAAGGAAAAACCCGAGATCTGCTGCAGAGATGCCGATGCCATTTAGCTTTAGCGAGGATGAATCCCTCGGCCTCGATTCGAGTTCCTCGCTGGATTAA 1584 0.4381 MEESGELQSDENKASTEKKNKRRLKTPSQVMALEKFYNEHKYPTEEMKQDLAEELGLTEKQISGWFCHRRLKDKRLLKDEAIGNGRQDRSSGVIQDRGSGRQDSCGSSKHGDYRYVDPKEVESHGLYNRDLSVPDMTYGHRNQYAENASEMDDTSSDSGSFLQDRMFPQGQDPYDVDPSRYPTHNGALPPLNPKGGNIGYKPSGYLKVKGEIEHAAITAVKKQLGRHYQEDGPLLGIEFDQLPPGAFEGQTADPVHEPYTIANPALLTSPEVSTGKRQSNISTKYVSYAKFSSKDSHEGVEFGSLHDSDLPDKQDKKARQSIKQRQPIYGYANHLPGRNSSDLYDDSNGEASAYTKVRSIVSKHGIEGMRSDSASNHSDHYEENPMVKQTDLMQGYDNINPKNVKRSEHVKPKPANSIRHPRMPVDAEERGLQPMRVAKEELHKGERKVKKYHDSYGARMLPNEITVSVRRAAKRAKVDLHKQFNPKQAPIAEIEQRKNPRSAAEMPMPFSFSEDESLGLDSSSSLD 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00457 527 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 523 - -
Adu07g00457 527 Gene3D - 8 91 - -
Adu07g00457 527 CDD homeodomain 19 75 IPR001356 GO:0003677
Adu07g00457 527 MobiDBLite consensus disorder prediction 79 136 - -
Adu07g00457 527 Pfam Homeodomain 19 75 IPR001356 GO:0003677
Adu07g00457 527 MobiDBLite consensus disorder prediction 297 322 - -
Adu07g00457 527 MobiDBLite consensus disorder prediction 297 347 - -
Adu07g00457 527 MobiDBLite consensus disorder prediction 148 172 - -
Adu07g00457 527 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Adu07g00457 527 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 523 - -
Adu07g00457 527 MobiDBLite consensus disorder prediction 148 165 - -
Adu07g00457 527 MobiDBLite consensus disorder prediction 107 126 - -
Adu07g00457 527 MobiDBLite consensus disorder prediction 400 421 - -
Adu07g00457 527 SMART HOX_1 18 80 IPR001356 GO:0003677
Adu07g00457 527 SUPERFAMILY Homeodomain-like 14 78 IPR009057 -
Adu07g00457 527 MobiDBLite consensus disorder prediction 88 106 - -
Adu07g00457 527 MobiDBLite consensus disorder prediction 7 24 - -
Adu07g00457 527 MobiDBLite consensus disorder prediction 482 527 - -
Adu07g00457 527 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00457 Adu-Chr7 4428549 4433190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00457 3 263 Homeobox Transcription Factor Family AT4G03250 57.955 2.48e-80 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Adu07g00457 Homeodomain 9.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00457 - - gmx:100803515 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00457 07 4428549 4433190 Adu07g00457 07 4428549 4433190 ECH