Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00436 ATGATGAACAACAACAGCACTATTCCTGGTTGGAACTTTGAGAGTGATGCCTGTGTCATCAATCAAAAGAGTCCAATAGGGCTGGACCAAGATCTTGTAGAGCTTCTATGGAAAAATGGGCAAGTAGTATTGAGCAGCCAAACACAAAGGAAACCAGTTCAGAAAAGTGATGCATCATCAACATTAAGGAATGGTGTTCATTGTGGAAACTCAAGTAGTAATTTGAGTCAACAAGAAGATGAGACAGCTTCATGGATTCAATACCAAGTTGAGGATCATCCAATGGGACAAGAACTTTGCTCATCAAACCTTTTATCTCAATTGACACCTTGTGAAGTTGAGGCTTACAAGCCAATCAAGCAATTGGAAGAACCAAAGTTTGCAAAATTTGCTACCCCAAATGCAAATTTAAGTCCACAACAACAAAACAACAATACAAAACCGATAAATCCTATGCCTGCTCCAAGATTCCAGGTTGCTCCTGATTCATCTAATCAGAAAACCAATGACTTTGTTGGTGGATCATCATCATCACAAAAGGTTCCAAAGTTTTCTCATCATTTTTCAGCACCCGCACAACAAAAGTTTAGGGAGAAAGTTAATGGTAACAATAATGTGCTACAAAGTGAGGGTAGGGAGTGTTCAGTTATGACAGTTGGATCAAGTCACTGTGGCAGCAACAACATCATCCCTCAGGAACAAGATACTACTTTCTCCGAAGCAGTTAAAGATTGTGTTCAGAGAAGTGTTCCTAATTGGAGTAACAATAAGGGGAAATCTTCAGAGATGATTGAGGCAACTGTGACTTCATCTTCTGGTGGCTCAGGTAGTAGTCTTGGAAAAACTACTTGTTCTTTATCAACAGGAAATCATCTTAGCCTAAAGAGGAAAATCACAGATGCAGATGAATCAGAAGAACAAAGTGAGGCCACACAGCCTAAATCAGGTGTTGGAAACAAAACATCTCAGAGATCAGGATCTTCTAGAAGAAACCGTGCAGCAGAAGTGCATAACCTATCTGAAAGGAGAAGAAGAGACAGGATCAATGAGAAAATGAGAACACTCCAACAACTCATACCAAACAGTAATAAGACAGACAAAGCATCAATGCTAGAAGAGGCAATTGAATACTTGAAGTCACTTCAGTTACAGCTTCAGGTAATGTGGATGGGAGCAGGGATGACACCAGTGATGTTTCCTGGGATTCAGCATTACATGTCACAAATGAGTGCAATGGGAATGGCTGCAGCATCACAACCTTCTCTTCCTTCTATGCAAAATCCAATGCAAATACCAAGAATGCCCCTTGACCAATCCAACATTCCTTCTACTGTGTCTGTGCCTCATCATCAAACACCTTCAAACCAGGCTTTGATGTGCCAAAATCCAGTTTTGGGTGCATTTAATTACCAAAATCATCAGATGCAAAATCCATGCCTTGCAGACCAATATGCACGTTACATGGCTTATCATCATCTCATGCAAACTGCATCTCAGCCAATGAATGTATTTGGATATGGTTCCCAGGCTGTTCAGCAGAGTCAAACAATGATGCCACCCAGCAATAACAATGGGACCATGAATGTTGCACCTAATTTTGAAGATGCTATCACTGCCAAAATGGGTACTTCCACCTTTCAACAACTGAACAATAACTAA 1659 0.4051 MMNNNSTIPGWNFESDACVINQKSPIGLDQDLVELLWKNGQVVLSSQTQRKPVQKSDASSTLRNGVHCGNSSSNLSQQEDETASWIQYQVEDHPMGQELCSSNLLSQLTPCEVEAYKPIKQLEEPKFAKFATPNANLSPQQQNNNTKPINPMPAPRFQVAPDSSNQKTNDFVGGSSSSQKVPKFSHHFSAPAQQKFREKVNGNNNVLQSEGRECSVMTVGSSHCGSNNIIPQEQDTTFSEAVKDCVQRSVPNWSNNKGKSSEMIEATVTSSSGGSGSSLGKTTCSLSTGNHLSLKRKITDADESEEQSEATQPKSGVGNKTSQRSGSSRRNRAAEVHNLSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQLQLQVMWMGAGMTPVMFPGIQHYMSQMSAMGMAAASQPSLPSMQNPMQIPRMPLDQSNIPSTVSVPHHQTPSNQALMCQNPVLGAFNYQNHQMQNPCLADQYARYMAYHHLMQTASQPMNVFGYGSQAVQQSQTMMPPSNNNGTMNVAPNFEDAITAKMGTSTFQQLNNN 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00436 552 MobiDBLite consensus disorder prediction 310 329 - -
Adu07g00436 552 Gene3D - 327 388 IPR036638 GO:0046983
Adu07g00436 552 MobiDBLite consensus disorder prediction 134 183 - -
Adu07g00436 552 MobiDBLite consensus disorder prediction 134 151 - -
Adu07g00436 552 MobiDBLite consensus disorder prediction 250 286 - -
Adu07g00436 552 CDD bHLH_AtPIF_like 332 395 - -
Adu07g00436 552 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 332 381 IPR011598 GO:0046983
Adu07g00436 552 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 329 395 IPR036638 GO:0046983
Adu07g00436 552 Pfam Helix-loop-helix DNA-binding domain 336 382 IPR011598 GO:0046983
Adu07g00436 552 MobiDBLite consensus disorder prediction 330 346 - -
Adu07g00436 552 MobiDBLite consensus disorder prediction 298 346 - -
Adu07g00436 552 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 8 524 IPR031066 -
Adu07g00436 552 MobiDBLite consensus disorder prediction 159 183 - -
Adu07g00436 552 PANTHER TRANSCRIPTION FACTOR PIF5 8 524 - -
Adu07g00436 552 SMART finulus 338 387 IPR011598 GO:0046983
Adu07g00436 552 MobiDBLite consensus disorder prediction 46 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00436 Adu-Chr7 4206168 4213219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00436 10 515 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 35.317 5.80e-61 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu07g00436 HLH 6.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00436 K16189 - gmx:100811777 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00652 10 7497591 7501977 Adu07g00436 07 4206168 4213219 PCT