Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00428 ATGATGCCCAATTTTCTCATTTCAAGGTTAGCTTCTTCCTTTAAAACCCTAAATCTCAACAACCCCAAATCCCAATTGAATCTTCTTCAACAGCATAAATCGCATCTCATTTTCTTCAATTCACTCGCAACCAAAGATACCAAACGCCCAAAAGATCACAACTTTACAATCTCCTATCTAATCGCCGAATGCGGATTCTCCCCCGAGACCGCCGCGCTTTTGTCACAAAAGGTTCAATTCAAAACCCCTGAAAAGCCAAACGCGGTCTTAGCCCTCCTCAGACAATATGGATTCTCCGATACGCAGATCGCTAAGTTCATTCAGAAGCGACCGTTGTTCCTCCTCACTGATGCGGAAAAGATCATTAAGCCCAAGCTCATGTTTTTCTCCTCCATTGGGATTCCACGCGTTCTCCTCCCAAAACTTGTGATTGAGAACCAAAACCTGTTAGCGAGGAGCTTGGAGAAGTGCCTCATTCCGCGCTATGAGGTCCTGAAGAGTGTTGTTCGAAGTGAGCAAGAAATTGTTTGTTCATTGAAGCGCGGTGCAATGGCTTTTGTGTTGTGTGATGTGATGAAGAATTTGATTCCCAACACAAAGGTTTTGAGAGATTTGGGTGTGCCTCAGAGTTCAATCTCACTGTTGGTTATGTTTCACCCGAGCGAGGCGTTTATGAATCATGAGAGGTTTGCTAAATGTGTGAAGTTGGCAAAGGAAATGGGGTTTGATCCTAACAAGTGCAATTTCATCAGTGCTGTACATGTGCTCTCGCATATGGATTGCGCGAAGATGGACCGAAAAATGAAGTCTTTGGAGAAATGGGGTTGGTCAAAAGAGGTGTCCCTTTCGTCGTTTAGAAAGTTCCCTACTTTCATGTCATATTCGCCGGAAAGGATCGGGCGAGCGATGAGATTCTTGGTGGAGGATATGGGTTGGTCTTCCGAGGACATTGCGAGGTTCCCCACAACTCTAGGATACAGCTTGGAGAAGAGGGTTATCCCTAGATGCCATGTGATTAAGGTCTTGAAATCGAAACGACTCGTCAAAGATCAGTTATGCTTGGCAACATTCATGTGTATGAAGGAGGAAGAGTTTTTGGAGGACTTTGTGACTAAGTATCTGGATCAGGTGCCTCTTCTACCTAAGATACACACGCGGTTGCAATTGCTCCCTTTTAACGTTTGGGTGAAATTCGAGAAAAATCAGGCAAATTTATTCGTGAAGGAATATCTGTTAGCAGATCCTCTGATTCCTTATACATCCATTATTGGTGGCATTTTTGCTTGCAAGATGGTTTATGATCTTACTCAGCTTTTTAGCACTGTTTACTTTAAGACCTATTCCAGCCTCACCAAAATCCAGCGTATCGAGTGGAATAACCGTTCTATGTCAACTATTCATGCCATTTTTATAACATCTATGTCATTGTACCTGGTGTTTTGCTCAACTCTATATTCTGACAATTGGTCGTCTGAAATTATTACACATAGAAGCTCACCAGTGTCTACATTTGCTCTAGGGGTTTCTGTTGGTTACTTCATCGCTGACCTTGCGATGATATTTTGGTATTTTCCTTCTCTTGGTGGATACGAGTATGTGATTCATCATCTGTTATCTTTAGTAGCAGTTGCCTATTCAATGTTGAGTGGAGAGGGGCAGCTTTACACATACATGGTCCTGATCTCTGAGACAACAACTCCAGGGATAAATTTGAGATGGTATCTAGATGTAGCTGGAATGAAAAAGTCAAAGGCTTATCTTGTCAACGGGGTTGTAATATTCGTTGCATGGCTGGTTGCCAGAATAATTTTGTTTGTGTACATGTTTTACCACGTCTACCTGCACTATGATCAGGTAGAGCATATGAGCACCTTTGGGGAAATGCTAGTTATTGTAGTGCCATTGGTACTATCAGCAATGAACTTGATTTGGTTCTCAAAGATTATCAAAGGCCTAAGGAAGACCTTGGCCAAGAGGCAGTAA 1983 0.4261 MMPNFLISRLASSFKTLNLNNPKSQLNLLQQHKSHLIFFNSLATKDTKRPKDHNFTISYLIAECGFSPETAALLSQKVQFKTPEKPNAVLALLRQYGFSDTQIAKFIQKRPLFLLTDAEKIIKPKLMFFSSIGIPRVLLPKLVIENQNLLARSLEKCLIPRYEVLKSVVRSEQEIVCSLKRGAMAFVLCDVMKNLIPNTKVLRDLGVPQSSISLLVMFHPSEAFMNHERFAKCVKLAKEMGFDPNKCNFISAVHVLSHMDCAKMDRKMKSLEKWGWSKEVSLSSFRKFPTFMSYSPERIGRAMRFLVEDMGWSSEDIARFPTTLGYSLEKRVIPRCHVIKVLKSKRLVKDQLCLATFMCMKEEEFLEDFVTKYLDQVPLLPKIHTRLQLLPFNVWVKFEKNQANLFVKEYLLADPLIPYTSIIGGIFACKMVYDLTQLFSTVYFKTYSSLTKIQRIEWNNRSMSTIHAIFITSMSLYLVFCSTLYSDNWSSEIITHRSSPVSTFALGVSVGYFIADLAMIFWYFPSLGGYEYVIHHLLSLVAVAYSMLSGEGQLYTYMVLISETTTPGINLRWYLDVAGMKKSKAYLVNGVVIFVAWLVARIILFVYMFYHVYLHYDQVEHMSTFGEMLVIVVPLVLSAMNLIWFSKIIKGLRKTLAKRQ 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00428 660 PANTHER TRAM, LAG1 AND CLN8 (TLC) LIPID-SENSING DOMAIN PROTEIN 397 660 - -
Adu07g00428 660 SMART lag1_27 453 657 IPR006634 GO:0016021
Adu07g00428 660 Pfam TLC domain 457 650 IPR006634 GO:0016021
Adu07g00428 660 Pfam mTERF 260 366 IPR003690 GO:0003690|GO:0006355
Adu07g00428 660 Pfam mTERF 90 245 IPR003690 GO:0003690|GO:0006355
Adu07g00428 660 ProSiteProfiles TLC domain profile. 453 657 IPR006634 GO:0016021
Adu07g00428 660 Gene3D Transcription termination factor 3, mitochondrial 171 377 IPR038538 -
Adu07g00428 660 PANTHER CT120 PROTEIN 397 660 - -
Adu07g00428 660 SMART mt_12 247 277 IPR003690 GO:0003690|GO:0006355
Adu07g00428 660 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Adu07g00428 660 SMART mt_12 314 348 IPR003690 GO:0003690|GO:0006355
Adu07g00428 660 SMART mt_12 183 208 IPR003690 GO:0003690|GO:0006355
Adu07g00428 660 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Adu07g00428 660 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00428 Adu-Chr7 4123289 4131816 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu07g00428 TRAM_LAG1_CLN8 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00428 - - gmx:100817391 473.396