Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00425 ATGATTCAAATGGAACCTGGTGTAGTTGGGGTTATGGACAGTGCAAATGAAGCATCATCATCTTTAAGCTTTGTATCATCTCATTTATCAAATGGTGGTTCAAGCAATAACAATGAGAATGGTGGTGGGGGTATTGAGATTTTGAGCTTGAAGAAGCTAAGCACTAGCCTTGAGAAGTTGTTGATTGATGCTGATTATGATTATAGTGATGCTGAGATTCTTGTTGAAGGTATCCCTGTGAGTGTTCATAGGTGTGTATTGGCTTCAAGAAGTCCTTTCTTTCATGAACTTTTCAAGAAAGGGAATGTTAGTAATGGCGAGGGTTCGGTTAAGGAAGGAGGAAAACCAAGGTATCTTATGTCTGAATTGGTGCCTTATGGGAAAGTTGGGCATGAATCCTTCCTTGTTTTCTTGCATTATTTATATACAGGGACCCTTAAGGCTTCACCACCAGAAGTAACAACATGTGTTGATGAAACATGTGTCCACGATGCTTGTCGCCCTGCAATCGATTATGCTTTGGAGCTCATGTATGCCTCTGCCACTTTCCAGATGAAAGAGCTTGTTTTGCTTTTTCAGCGGCGCCTTCTAAACTTTGTGGAGAAAGCTGTAGTGGAAGATGTGATTCCTGTTCTTATGGCAGCCTTCCACTGTCAATTAAGCCAGCTTCGCTTGCAATGCACTCAAAGAGTAGCAAGGTCTGATCTTGACACCACATCTTTGGAAAAGGAGTTCCCTCAGGAAGTTGTGGACGAAATCAAGTCGCTGCGAGCACAATCTGTGCTGGAATCCACACCAGCAGAAATGGAAGTGGAGACTTTGAATGAAAAGAGTATCAGGAGAATCCATAAGGCAATGGACTCGGATGATGTCGAGCTACTTAAGCTTCTTTTGAATGAGTCTAAGGTCACTCTAAATGATGCTTATGCACTTCACTATGCATGTGCCTATAGTGATTCTAAGGTTATTCAAGAGGTTCTTAATCTAGGCTTGGCTGATATTAACCTTAGAAATCCCCGAGGATATTCAGTTCTTCATGTCGCTGCAAGGCGAAAGGATCCATCCATTTTGGTAGCACTGCTGAAGAAAGGGGCCAATGCATCAGATACTACTCCTGATGGACAAACAGCTCTTGTGATTTGTCAGAGGTTGACGCGGCGCAAGGATTATCATGAGGAAACCGTGCAGGGCAAGGAATCTAACAAAGACAGGCTCTGTGTTGATGTTCTTGAGCGAGAAATGAGAAGAAATTTCAAGTGTGTGACTATGTCTGATTCATCTGAGACAACTGCTGATGATTTGCATATGAAGCTGGATTACTTTGAAAATCGAGGTAGCGAATTCTTTCAACAGAATTGA 1359 0.4231 MIQMEPGVVGVMDSANEASSSLSFVSSHLSNGGSSNNNENGGGGIEILSLKKLSTSLEKLLIDADYDYSDAEILVEGIPVSVHRCVLASRSPFFHELFKKGNVSNGEGSVKEGGKPRYLMSELVPYGKVGHESFLVFLHYLYTGTLKASPPEVTTCVDETCVHDACRPAIDYALELMYASATFQMKELVLLFQRRLLNFVEKAVVEDVIPVLMAAFHCQLSQLRLQCTQRVARSDLDTTSLEKEFPQEVVDEIKSLRAQSVLESTPAEMEVETLNEKSIRRIHKAMDSDDVELLKLLLNESKVTLNDAYALHYACAYSDSKVIQEVLNLGLADINLRNPRGYSVLHVAARRKDPSILVALLKKGANASDTTPDGQTALVICQRLTRRKDYHEETVQGKESNKDRLCVDVLEREMRRNFKCVTMSDSSETTADDLHMKLDYFENRGSEFFQQN 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00425 452 Pfam Ankyrin repeats (many copies) 328 378 IPR002110 GO:0005515
Adu07g00425 452 SUPERFAMILY POZ domain 65 198 IPR011333 -
Adu07g00425 452 CDD BTB_POZ_NPR_plant 51 200 - -
Adu07g00425 452 ProSiteProfiles Ankyrin repeat region circular profile. 340 368 - -
Adu07g00425 452 SMART BTB_4 69 200 IPR000210 GO:0005515
Adu07g00425 452 SUPERFAMILY Ankyrin repeat 270 383 IPR036770 -
Adu07g00425 452 SMART ANK_2a 340 369 IPR002110 GO:0005515
Adu07g00425 452 SMART ANK_2a 306 336 IPR002110 GO:0005515
Adu07g00425 452 SMART ANK_2a 277 305 IPR002110 GO:0005515
Adu07g00425 452 PANTHER REGULATORY PROTEIN, PUTATIVE-RELATED 12 444 - -
Adu07g00425 452 ProSiteProfiles BTB domain profile. 69 150 IPR000210 GO:0005515
Adu07g00425 452 Gene3D Potassium Channel Kv1.1; Chain A 48 232 IPR011333 -
Adu07g00425 452 Pfam NPR1/NIM1 like defence protein C terminal 382 444 IPR021094 -
Adu07g00425 452 ProSiteProfiles Ankyrin repeat profile. 340 372 IPR002110 GO:0005515
Adu07g00425 452 Pfam BTB/POZ domain 67 155 IPR000210 GO:0005515
Adu07g00425 452 Gene3D - 239 410 IPR036770 -
Adu07g00425 452 Pfam Domain of unknown function (DUF3420) 235 283 IPR024228 -
Adu07g00425 452 PANTHER REGULATORY PROTEIN NPR3 12 444 IPR044292 GO:0009862|GO:2000022|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00425 Adu-Chr7 4113473 4116934 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Adu07g00425 BTB 5.9e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00425 K14508 - gmx:100814739 606.675