Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00419 ATGGATGTGGCTAAGTTGTACATGAACAACGACTACTCCGAAGAACATGAACATGAATATGAACATGATGAAGATGATGATGAGATGATGAAAGAGGAGAAAGAAGTTGTGCTTCCTGGGTTTAGATTCCACCCAACAGATGAAGAGCTTGTTGGGTTTTATCTTCGGAGGAAGGTTGAGAAGAAGCCTCTTAAGATTGAACTTATCAAACATGTTGATATCTACAAATATGATCCATGGGATCTTCCAATTGGTTCATCAATGGGGGAGAAGGAATGGTATTTCTTTTGCATAAGAGGGAGAAAGTACAGGAACAGCATAAGGCCTAATAGGGTTACAGGATCAGGGTTTTGGAAAGCCACAGGGATTGATAAACCTATATACAGTGCTAATTATAATAATAATTATAATAATAATAGTAATAATAATAGTAAGGAGCATGGTGATCATCATGAATGCATTGGACTGAAGAAATCATTGGTTTATTACCGGGGAAGTGCTGGAAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTCCCACCCAATAATAATAATGGAGCAAAATTATTAAGCAATAATCAAGAAGCTAATAATGCTACCAAGGATCTTCATGAAGCTGAAGTGTGGACACTATGCAGAATATTCAAAAGGATTCCAACATACAAAAAGTACACACCAAATTTGAAAGATTCATCAACATCACCACTCATGAACAAACCCATCAATAACATTAACCACCAAACTGATTCCTCAGTAACTTCCATATCATGCAGCTTAGAATCTGACAACAACAATAGCAAGCAATTCTTGACTTTCACTAACACTATGGGGATTCAACAATGTGAAAGGAAGCCTCTTGTTATTGGACATGTTGATGAAAGGAACAACAACTTTTTCTTAGACCATTCATCAATACATCATCAACAAGCTCCAACAACAATTACTACTACTGCTTTGTCATCATCATCATACTCATCATGGAACCAGCACCATGTTGTGGAGGATTACTTGTTTGCAAATGAGAATTGGGATGATCTTAGATCTGTGGTTGAGTTTGCCACTGACCCCAATAATTCCAAGGTTTATCTATGA 1101 0.3724 MDVAKLYMNNDYSEEHEHEYEHDEDDDEMMKEEKEVVLPGFRFHPTDEELVGFYLRRKVEKKPLKIELIKHVDIYKYDPWDLPIGSSMGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSANYNNNYNNNSNNNSKEHGDHHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNNNNGAKLLSNNQEANNATKDLHEAEVWTLCRIFKRIPTYKKYTPNLKDSSTSPLMNKPINNINHQTDSSVTSISCSLESDNNNSKQFLTFTNTMGIQQCERKPLVIGHVDERNNNFFLDHSSIHHQQAPTTITTTALSSSSYSSWNQHHVVEDYLFANENWDDLRSVVEFATDPNNSKVYL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00419 366 SUPERFAMILY NAC domain 34 219 IPR036093 GO:0003677|GO:0006355
Adu07g00419 366 Pfam No apical meristem (NAM) protein 39 182 IPR003441 GO:0003677|GO:0006355
Adu07g00419 366 MobiDBLite consensus disorder prediction 1 27 - -
Adu07g00419 366 Gene3D NAC domain 46 223 IPR036093 GO:0003677|GO:0006355
Adu07g00419 366 ProSiteProfiles NAC domain profile. 37 220 IPR003441 GO:0003677|GO:0006355
Adu07g00419 366 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 360 - -
Adu07g00419 366 PANTHER - 22 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00419 Adu-Chr7 4026956 4030369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00419 25 220 NAC Transcription Factor Family AT5G39820 58.654 4.93e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu07g00419 NAM 7.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00419 - - ahf:112767137 640.958