Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00412 ATGGTTTTGAAGAAAGTTTCTTTGGTTCTGGTTCTACTTGTCATATGCAACTCTGTTGTAGAATCCTTTTCAAGTAGGAACCATGATCTCATCAACAAGAATGGTTCCTCTCTTGCAGCCATAAAGTTCCCTAATCATCCAAGCTTCAATGCTGTGACTTCTTCTGGGGACACAGGGTGTAGCTTCACAAGTTCTGCCATGAATTTAGGTGAAGAAACCAATGATGATGATGGTGATAGTGATGATGAAGGTGAGGCTTTTCTAGAAGCAAAGCCAAACAAGGAAATGGTGAAGCTTCATTTGAGACACTCAATGAACAAAGATGATGATGATGTTGATTTCACATCAAGGGATTTGACCAGAATTCAAACCCTGCATAGAAGGGCCATGGAGAAGAAGAACCAAAACACCTTCTCAAGGCTGCAAAAGGCACAGGAGAAATCCAGACCAAAGTCAAAGCATCACCACAAGCCAGAGAAGTCTCCGGCCGCGGCGGCTGCGCCACCGGATTATCTTGCAAACCAGCTTGTGGCAACCTTGGAATCTGGTGTCAGTCTTGGCTCTGGAGAGTACTTCATGGATGTGTTTATTGGTACACCTCCTAAGCATTTCTCTCTAATACTAGATACTGGTAGTGACCTTAATTGGATTCAATGTGTTCCTTGTTTAGCATGTTTTGATCAAACTGGTCCTTATTATGATCCTAGAGAATCTAGTTCCTTTAAGAACATTAGCTGTAGTGATCCGCGCTGCCAATTAGTAACCTCGCCGGATCCACCTAGGCCTTGCAAGGGTAAGGATCAGAGTTGTCCATACTTCTATTGGTATGGAGATAGCTCGAATACAACCGGTGATTTCGCCCTCGAGACCTTTACAGTTAACCTCACCACGCCTTCAGGGAAATCCGAGCTAAAGCATGTGGAGAATGTGATGTTTGGCTGTGGACATTGGAATAGAGGATTGTTTCATGGGGCTGCAGGGTTGTTAGGATTGGGGAGAGGGCCATTGTCATTTGCATCTCAGCTTCAATCCCTTTATGGCCATTCATTTTCCTATTGCCTTGTGGATAGGAATAGCAATTCTAGTGTTAGCAGCAAATTGATATTTGGTGAGGATAAGGAGCTTTTAGGCCACCCTAATTTGAACTACACTTCATTTGTTGGTGGCAAAGATAATTCAGTTGATACATTTTACTATGTTCAGATCAAATCTTTGATGGTTGATGGTGAGGTATTGGATATTCCTGAGGAAACTTGGAACTTATCAGCACAAGGTGCTGGTGGAACAATCATTGATTCTGGCACCACTTTAACTTATTTTGCTGATCCTGCTTATGACATCATTAAGGATGCATTTGTGAAGAAAATTAAGGGATATCCAATTGTTGAAGGCCTTCCACCTTTAAAGCCATGTTACAATGTGTCTGGGATTGATCAGATGGAGCTGCCAGATTTTGGGATCTTGTTTTCAGATGGAGCAGTTTGGAACTTCCCTGTGGAGAATTACTTCATCCAGATAGATCCAGATGTCGTTTGTCTGGCGATCTTAGGGACTCCCCGGCACGCCCTTTCGATCATCGGAAACTATCAGCAGCAGAATTTCCATATCCTCTATGATATGAAGAAATCAAGGCTTGGTTATGCACCAAGGAAGTGTGCTGATTTTCACCAATACCAGGTGGTGGGTAGGGCTCTTCCCACAGAGAAAGATGAGCACCCTAAGATCTACCGCATGAAGCTTTGGGCCACCAATGAGGTTCGTGCCAAATCCAAGTTCTGGTACTTTTTGAGAAAGCTAAAGAAGGTCAAGAAGAGCAATGGGCAAGTGCTGGCCATCAATGAGATTTTCGAGAAAAATCCTACCAAGATAAACAACTATGGAATCTGGCTCCGATATCAGAGTCGCACCGGTTATCACAATATGTACAAGGAATTCCGAGACACTACCTTAAACGGTGCTGTTGAACAAATGTACAATGAGATGGCGTCGCGTCATAGGGTCAGATTTCCTTGCATCCAGATCATCAAGACGGCAACCGTCCCCGCCAAGATGTGCAAAAGGGAGAGCACCAAGCAGTTCCACAACTCTAAGATCAAGTTCCCATTGGTGTTCAAGAAGGTGAGGCCCCCAACCAGGAAGCTGAAGACAACCTACAAAGCAACCAGACCCAACCTGTTCATGTGA 2184 0.44 MVLKKVSLVLVLLVICNSVVESFSSRNHDLINKNGSSLAAIKFPNHPSFNAVTSSGDTGCSFTSSAMNLGEETNDDDGDSDDEGEAFLEAKPNKEMVKLHLRHSMNKDDDDVDFTSRDLTRIQTLHRRAMEKKNQNTFSRLQKAQEKSRPKSKHHHKPEKSPAAAAAPPDYLANQLVATLESGVSLGSGEYFMDVFIGTPPKHFSLILDTGSDLNWIQCVPCLACFDQTGPYYDPRESSSFKNISCSDPRCQLVTSPDPPRPCKGKDQSCPYFYWYGDSSNTTGDFALETFTVNLTTPSGKSELKHVENVMFGCGHWNRGLFHGAAGLLGLGRGPLSFASQLQSLYGHSFSYCLVDRNSNSSVSSKLIFGEDKELLGHPNLNYTSFVGGKDNSVDTFYYVQIKSLMVDGEVLDIPEETWNLSAQGAGGTIIDSGTTLTYFADPAYDIIKDAFVKKIKGYPIVEGLPPLKPCYNVSGIDQMELPDFGILFSDGAVWNFPVENYFIQIDPDVVCLAILGTPRHALSIIGNYQQQNFHILYDMKKSRLGYAPRKCADFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKINNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATVPAKMCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKATRPNLFM 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00412 727 Hamap 50S ribosomal protein L18Ae [rpl18a]. 555 618 IPR028877 -
Adu07g00412 727 ProSiteProfiles Peptidase family A1 domain profile. 191 548 IPR033121 -
Adu07g00412 727 Gene3D Acid Proteases 170 371 IPR021109 -
Adu07g00412 727 PANTHER ASPARTYL PROTEASES 23 554 IPR001461 GO:0004190|GO:0006508
Adu07g00412 727 Pfam Xylanase inhibitor N-terminal 191 370 IPR032861 -
Adu07g00412 727 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 556 677 IPR023573 GO:0003735|GO:0005840|GO:0006412
Adu07g00412 727 Pfam Xylanase inhibitor C-terminal 398 548 IPR032799 -
Adu07g00412 727 SUPERFAMILY Acid proteases 183 555 IPR021109 -
Adu07g00412 727 Coils Coil 127 147 - -
Adu07g00412 727 CDD pepsin_A_like_plant 190 552 IPR034161 -
Adu07g00412 727 Gene3D - 621 696 - -
Adu07g00412 727 PRINTS Pepsin (A1) aspartic protease family signature 524 539 IPR001461 GO:0004190|GO:0006508
Adu07g00412 727 PRINTS Pepsin (A1) aspartic protease family signature 429 440 IPR001461 GO:0004190|GO:0006508
Adu07g00412 727 PRINTS Pepsin (A1) aspartic protease family signature 197 217 IPR001461 GO:0004190|GO:0006508
Adu07g00412 727 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 23 554 - -
Adu07g00412 727 Gene3D - 554 620 - -
Adu07g00412 727 MobiDBLite consensus disorder prediction 126 167 - -
Adu07g00412 727 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 206 217 IPR001969 GO:0004190|GO:0006508
Adu07g00412 727 SUPERFAMILY RplX-like 620 695 - -
Adu07g00412 727 MobiDBLite consensus disorder prediction 66 85 - -
Adu07g00412 727 Gene3D Acid Proteases 372 553 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00412 Adu-Chr7 3911570 3918197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00412 555 727 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 91.908 1.65e-114 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00412 K22683 - zju:107416111 1051.97