Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00404 ATGTCATCGAATAGTTCTTTGAATGTCGAATTGTCGAAGAAGACATCTTTTTTCGGGTTGAAACGATGGGTTTTGATTGGGATCGGAGTCAGTGCCTTTATAGTGCTGATTCTTGGTGTATTGTCTATATGGGTGATGTTTCGGAGAAAGTCTAGGAGATCTATTGACAAGTACTCTCAATCCAAGATACCGAATGTGTCGAAAGATATCAGGGTTGATAAGGTTGGGGTGCAGAGTTCTTATGTGGAGCCGGAAAATGTGTCTGTTTCAGTTCATGACAAGGCAAATGATAAGAGTTCAGAGAAGATAACAGTTCATTTGGCCATGAGTAAATCCAGTGATCATGATAATATTAGTCAGTGCAGTTCAAGCTATCACCACGAGAGAGGATTTAGTTCGATGTCTGGGGAAGAAGGAAGTTCCGGGAATGGTAAGAAGCAATCTATGTTGTCATATGGAGGAGGGATGGTGACTGCCTCTCCTTTAGTTGGGTTGCCGGAATTTTCTCATCTCGGGTGGGGCCACTGGTTTACACTCAGAGATCTTCAACTAGCAACGAATCGTTTCTCGCAAGAGAATGTTATCGGTGAGGGTGGCTATGGGGTTGTTTATAGGGGCAGATTGATCAATGGAAGCGAGGTGGCAGTAAAGAAGCTTCTTAACAATTTGGGACAAGCAGAGAAAGAATTCAGGGTTGAAGTCGAGGCGATAGGCCATGTTAGACATAAACATCTCGTGCGCCTGCTTGGATATTGCGTAGAGGGTGTTAACAGGCTGCTAGTGTATGAATATGTGAATAATGGTAACTTAGAGCAATGGCTGCATGGCTCCATGGAACAGGGGACACTAACTTGGGAGGCACGCATCAAAGTTGTGCTCGGCACAGCCAAAGCGCTTGCTTACTTACATGAAGCAATTGAACCGAAAGTTGTTCACCGGGATATAAAGTCTAGCAATATATTGATTGATGACGAGTTCAACGCAAAGGTTTCTGATTTCGGTCTGGCCAAATTATTGGATTCAGGAGAAAGTCACATAACAACTAGAGTTATGGGAACATTTGGATATGTGGCACCAGAATATGCTAATAGTGGCCTCTTAAATGAGAAGAGCGACATTTACAGCTTCGGTGTCCTCCTGCTGGAAGCAGTTACCGGAAGGGACCCTGTAGATTATGCTCGGCCGCCTAATGAGGTTAATCTGGTTGAATGGCTCAAGATGATGGTGGGAACAAGGAGGGCCGAGGAAGTAGTTGACTCGAGACTTGAGGTTAAACCAACAACACGCGCTTTGAAGCGTGCCCTTCTTGTTGCGCTGAGGTGCGTCGATCCTGATGCGGATAAAAGGCCTAAAATGAGTCAAGTTGTAAGGATGCTTGAAGCCGATGAATATCCATTTCGAGAGGATCGAAGGAATAGAAAGAGCCGCACTGCCAGCATGGAAATCGAGTCTGTTAGCTGTGGTCCATCCATTGGCGAAAAGGCAGGGAATTCCGAAGGCATTGTGCCGGCGAGAATGGAGGGACAGGGACAGGATTGA 1539 0.4548 MSSNSSLNVELSKKTSFFGLKRWVLIGIGVSAFIVLILGVLSIWVMFRRKSRRSIDKYSQSKIPNVSKDIRVDKVGVQSSYVEPENVSVSVHDKANDKSSEKITVHLAMSKSSDHDNISQCSSSYHHERGFSSMSGEEGSSGNGKKQSMLSYGGGMVTASPLVGLPEFSHLGWGHWFTLRDLQLATNRFSQENVIGEGGYGVVYRGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVNRLLVYEYVNNGNLEQWLHGSMEQGTLTWEARIKVVLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPPNEVNLVEWLKMMVGTRRAEEVVDSRLEVKPTTRALKRALLVALRCVDPDADKRPKMSQVVRMLEADEYPFREDRRNRKSRTASMEIESVSCGPSIGEKAGNSEGIVPARMEGQGQD 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00404 512 SMART serkin_6 189 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00404 512 PANTHER RECEPTOR-LIKE KINASE PLANT 2 500 - -
Adu07g00404 512 ProSiteProfiles Protein kinase domain profile. 189 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00404 512 PANTHER OS01G0323000 PROTEIN 2 500 - -
Adu07g00404 512 MobiDBLite consensus disorder prediction 467 512 - -
Adu07g00404 512 SUPERFAMILY Protein kinase-like (PK-like) 173 461 IPR011009 -
Adu07g00404 512 CDD STKc_IRAK 195 460 - -
Adu07g00404 512 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
Adu07g00404 512 MobiDBLite consensus disorder prediction 110 147 - -
Adu07g00404 512 Pfam Protein kinase domain 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00404 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Adu07g00404 512 Coils Coil 209 229 - -
Adu07g00404 512 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Adu07g00404 512 Gene3D Transferase(Phosphotransferase) domain 1 265 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00404 Adu-Chr7 3855326 3859050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00404 19 462 Trihelix Transcription Factor Family AT1G70460 41.020 9.58e-102 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Adu07g00404 Pkinase 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00404 - - gmx:100778444 838.565