Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00399 ATGTTTGGTGAAATGGATAGAAAGCAAGAACAAGAAAAAGGTAACCTGAATAATAATAATAATAACAATAATAATAATAATAATAATAATAAGTCTGGCATTGATGTTACTCTAATATCTGCCACCACCAAAGTTCCAAAAGCAGTTTCACCGGTTTCCTCTGCTGCTGAGGGGGAAGCCTTAAGGCGGCCGCGTGGCAGGCCTGCCGGCTCCAAGAACAAGCCGAAGCCACCAATAATTGTGACAAGGGACAGTGCTAATGCACTCAAAGCTCATGCTATGGAAGTAAGCTCTGGCTGTGATGTGAATGAGAGCTTGTTGAACTTTGCAAGGAGGAAGCAGAGAGGCCTCTGCATACTAAGTGGAACTGGCTGTGTGACAAATGTAACTCTGCGCCAACCGGCTTCATCCGGCGCCATTGTGACTCTTCACGGCCGATTCGAGATCCTCTCATTGCTGGGGTCAATCCTTCCCCCACCAGCACCACCAGGAATCACTGGCCTCACCATTTACTTGGCTGGTGCTCAGGGGCAAGTTGTAGGAGGTGCTGTTGTTGGTGCCTTGATTGCTTCAGGACCTGTTGTGATCATGGCTGCATCATTCATGCATGCTACCTTCGATCGCCTGCCATTGGAAGATGAAGAACTCACGGCTGCAATGCAGAATCAGCATTACCAAAACGGACGCACCACGCATCATCTCGATATCTCAGACTTGTATGCAATGCCACAGAACCTTCTCACCAATGGAACAATGGCACCAGAGATATATTCTTGGGCACCAGGGAGGAACTTGTCAAAAAGCTGA 807 0.4758 MFGEMDRKQEQEKGNLNNNNNNNNNNNNNNKSGIDVTLISATTKVPKAVSPVSSAAEGEALRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILSGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPVVIMAASFMHATFDRLPLEDEELTAAMQNQHYQNGRTTHHLDISDLYAMPQNLLTNGTMAPEIYSWAPGRNLSKS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00399 268 MobiDBLite consensus disorder prediction 46 79 - -
Adu07g00399 268 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 201 IPR005175 -
Adu07g00399 268 CDD DUF296 92 172 IPR005175 -
Adu07g00399 268 ProSiteProfiles PPC domain profile profile. 86 224 IPR005175 -
Adu07g00399 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 267 IPR014476 GO:0003680
Adu07g00399 268 MobiDBLite consensus disorder prediction 1 33 - -
Adu07g00399 268 PIRSF ESCAROLA 2 264 IPR014476 GO:0003680
Adu07g00399 268 MobiDBLite consensus disorder prediction 14 33 - -
Adu07g00399 268 Gene3D - 88 233 - -
Adu07g00399 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 20 267 - -
Adu07g00399 268 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00399 Adu-Chr7 3807003 3807809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00399 45 267 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 74.222 1.23e-105 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00399 - - vra:106765118 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00399 07 3807003 3807809 Adu07g00399 07 3807003 3807809 ECH