Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00302 ATGCGGAGACCCAAATCAAAAGATTTCCGGAAGCAACAGCGAATTTCCGAGGAGAGCGAGATTGAGCTTCTAAAATCATGGATCGAGAGCCAGAAACCAGAGTCGGGTTCCAACCCAATGTCCCTTCCTCCTTTTCCCAAAAACGCGCCAGTGGGGCGCGTAGAGGACACCGCGTTTTCGCGGTACGCTGGTGTTGGTAGGTTCCAGCAGTTACCGCTTTCGAAGAAGACGAAGGATGGGTTGAGAGCGGCGAAGTTCGTGTCGATGACGGAGATTCAGAGGGCTTCGCTGCCCCACGCTCTTTGTGGCCGAGATATTCTCGGCGCCGCCAAAACGGGTTCCGGAAAAACTCTTGCTTTCATCATCCCTGTGTTGGAGACGTTGTATAGAGAGAGATGGGGACCTGAGGATGGTGTTGGGAGTATTATAATATCTCCTACAAGGGAACTAGCTGGTCAGTTGTTTGATGTGTTGAAGTCTGTTGGCAAGTTCCATAATTTCAGTGCTGGTCTTCTCATTGGTGGTCGCAAGGATGTTGACATGGAGAAGGAACGAGTCAATGAGCTCAACATATTGATTTGCACTCCCGGTCGCCTACTGCAACACATGGATGGGACTCCCAATTTTGAATGTTCGCAGATGCAGGTTTTGGTACTAGATGAGGCTGATCGTATTCTCGACAGTGGGTTCAAGAAGGAACTAAATGCAATCATTTCACAACTACCAAAGCGTAGACAAACCTTGCTTTTCTCAGCAACCCAGACAAAGTCAATTCAAGATCTTGCAAGACTAAGTTTGAAGGACCCAGAGTATCTGAGTGTGCATGAGGAGTCTGTGACTGCCACTCCTACACTTTTGAAGCAAATTGTGATGGAGGTTGCACTTGACCAAAAGTTAAACATGCTGTGGAGTTTCATAAAGACTCACCTTCAGTCGAAAATACTTGTTTTTCTTTCAAGTTGTAAACAGGTAAAATTCGTGTTTGAAGCATTTAAAAAACTACACCCTGGCATTCCGTTGAAGTGTCTACATGGGAGGATGAAGCAGGAAAGAAGAATGGCAATCTATTCCGAGTTTTGTGAGAAGCGCTCTGTGCTCTTTTCGACTGACGTGGCAGCAAGAGGCCTTGATTTTAATAAAGCAGTTGACTGGGTTGTTCAGGTGGATTGTCCTGAAAATGTAGCATCATACATACACAGAGTTGGCCGTACTGCTCGTTATAAATCTGTTGGAAAGTCAGTTTTATTTCTGTTGCCTTCAGAAATGCAAATGTTTGAGAAGTTAAAAGCAGCAAAAGTTCCTGTTCACTTTAATAAGCCAAAGAAAGAATTAGTACAACCAGTTTCGACTTTGTTGGCATCTTTACTGGTCAAGTATCCAGATCTGCAGCATCGGGCTCAAAGGGCCTTTGTCACATATTTGAGATCCATACATATACAGAAGGATAAAGAGATATTTGATGTTATGAAACTACCTATTGATGAATATTCAGCATCATTAGGCTTACCAATGACCCCCAAAATCCGTTTCCTGAACCAAAAAGGAAACCAAAAAATTAAATCTAAGGGTGCATTGGCAAAAACAATTTTAGATGAACCACAACATCAAAAAGAGGAAAATGAATTGAAGATATCCATAAAGGAGCTAGACTCAAGTGATTCTGAGGGTGAGGAAACAGAAAATGATCTTCTTTTGGCAGCTGATAACCCGAAAGAAGAAGGAAAGGCATCTGAAGATGCAGAAATCATGCCTGCAACTCGTATATTGAAGAAAAAGAAGCTCAAAATCAATGTACATCGGCCACTGGGGACTAGGGTTGTATTTGATGATGAAGGTCACACACTTCCTCCTCTAGCCAGGATTGCTGATACGCAAAGCGGCAAGGAATCATTGCTGCTTGACCCAGAACAAAAAGCTGAATACTATAGAAAGATGCGCGAGGATTTGAAGAAGGCAGACAAGGAAGACAAGCTTCTGGAGCGACAACGGCGTAGAGAAAAAAGAATCAAACAGAAGATGAAGTGGAAGGAAGGAAACATGGATAAAGATGGAGATGAAGATGATGATGTTTCTGGGTCCGAATCAGATAAAGCCACGGCAAGACCGAATAAAAAGAGTAAAGTATATTTTGACAGTGACAGTGATGATGGTGAAAGAAATGAAGCCACAGGGGAGGGAGCCGTTGGTGCTGGTTCTGTTAGTTTGGAGGAGCAAGAAGCTCTAGCTTTGAAATTATTGAATTCCATGCACTCATCATAG 2259 0.4343 MRRPKSKDFRKQQRISEESEIELLKSWIESQKPESGSNPMSLPPFPKNAPVGRVEDTAFSRYAGVGRFQQLPLSKKTKDGLRAAKFVSMTEIQRASLPHALCGRDILGAAKTGSGKTLAFIIPVLETLYRERWGPEDGVGSIIISPTRELAGQLFDVLKSVGKFHNFSAGLLIGGRKDVDMEKERVNELNILICTPGRLLQHMDGTPNFECSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPTLLKQIVMEVALDQKLNMLWSFIKTHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSVGKSVLFLLPSEMQMFEKLKAAKVPVHFNKPKKELVQPVSTLLASLLVKYPDLQHRAQRAFVTYLRSIHIQKDKEIFDVMKLPIDEYSASLGLPMTPKIRFLNQKGNQKIKSKGALAKTILDEPQHQKEENELKISIKELDSSDSEGEETENDLLLAADNPKEEGKASEDAEIMPATRILKKKKLKINVHRPLGTRVVFDDEGHTLPPLARIADTQSGKESLLLDPEQKAEYYRKMREDLKKADKEDKLLERQRRREKRIKQKMKWKEGNMDKDGDEDDDVSGSESDKATARPNKKSKVYFDSDSDDGERNEATGEGAVGAGSVSLEEQEALALKLLNSMHSS 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00302 752 SMART DUF4217_3 447 510 IPR025313 -
Adu07g00302 752 MobiDBLite consensus disorder prediction 650 734 - -
Adu07g00302 752 MobiDBLite consensus disorder prediction 28 49 - -
Adu07g00302 752 Pfam Helicase conserved C-terminal domain 298 407 IPR001650 -
Adu07g00302 752 SMART helicmild6 325 408 IPR001650 -
Adu07g00302 752 CDD DEADc_DDX10 77 275 - -
Adu07g00302 752 PANTHER RNA HELICASE 57 529 - -
Adu07g00302 752 MobiDBLite consensus disorder prediction 693 722 - -
Adu07g00302 752 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 66 94 IPR014014 GO:0003724
Adu07g00302 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 427 IPR027417 -
Adu07g00302 752 Coils Coil 642 662 - -
Adu07g00302 752 Gene3D - 53 278 IPR027417 -
Adu07g00302 752 Pfam Domain of unknown function (DUF4217) 452 508 IPR025313 -
Adu07g00302 752 PANTHER ATP-DEPENDENT RNA HELICASE DDX10-RELATED 57 529 - -
Adu07g00302 752 Pfam DEAD/DEAH box helicase 90 260 IPR011545 GO:0003676|GO:0005524
Adu07g00302 752 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 272 IPR014001 -
Adu07g00302 752 CDD SF2_C_DEAD 286 417 - -
Adu07g00302 752 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 218 226 IPR000629 -
Adu07g00302 752 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 294 452 IPR001650 -
Adu07g00302 752 Gene3D - 284 531 IPR027417 -
Adu07g00302 752 SMART ultradead3 85 289 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00302 Adu-Chr7 2796883 2801104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00302 93 429 Eukaryotic Initiation Factors Gene Family AT3G19760 29.240 4.78e-35 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00302 K14776 - gmx:100792106 1175.61