Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00291 ATGGTGGCAACAAGGTGTAAGGAGGTTTTCTTTGGAATATTCATGGAAGCCATGGAAACAATTCTTTATGCTGCATTCACTGTTATTCTAGCACTAGGAGGATCAATAGTAGGAACAATAGCAGGAGGAATCAAAGGGCAAACAACAGAAGCTGGTTTTCTTGATGGAGCTGGAAAAGGAGCAGTTACAGGAGCCATTGCTGCCATTGAATTGTTGAACTTTAGAGCCATTGATGACCCTTTAACCAAGATGAACACAGCAGAAACAAGTTCACAGAGAGAAGTATCATCAAATATTTATGAAAACAAAGGGGTTACAGGGATGGCACAGAGTGTAATTCTGAAGCTTCCATTTCAGAAATTTAAATCCAATAAGAAACTAATGTACATGTCAAGCTGCTCAATTTGCTTCCAGGATTTTGAGGATGAAGAATTGATTAGGATACTTCCAAAATGTGGCCACATTTTTCATTTACAATGTATAGACAAATGGTTAATCCAACAAGGATCATGCCCTATGTGTAGAACTCATGTTTCTTCTTATCACATTCATGACTTGTAG 561 0.3797 MVATRCKEVFFGIFMEAMETILYAAFTVILALGGSIVGTIAGGIKGQTTEAGFLDGAGKGAVTGAIAAIELLNFRAIDDPLTKMNTAETSSQREVSSNIYENKGVTGMAQSVILKLPFQKFKSNKKLMYMSSCSICFQDFEDEELIRILPKCGHIFHLQCIDKWLIQQGSCPMCRTHVSSYHIHDL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00291 186 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 84 178 IPR044523 -
Adu07g00291 186 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 5 84 IPR044523 -
Adu07g00291 186 Pfam Ring finger domain 132 175 IPR001841 -
Adu07g00291 186 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 84 - -
Adu07g00291 186 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 84 178 - -
Adu07g00291 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 184 IPR013083 -
Adu07g00291 186 SMART ring_2 133 174 IPR001841 -
Adu07g00291 186 CDD RING-H2_PA-TM-RING 133 175 - -
Adu07g00291 186 ProSiteProfiles Zinc finger RING-type profile. 133 175 IPR001841 -
Adu07g00291 186 SUPERFAMILY RING/U-box 132 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00291 Adu-Chr7 2721532 2723982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00291 2 178 C3H Transcription Factor Family AT5G66070 30.374 4.52e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00291 - K19041 gmx:100305612 225.328