Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00290 ATGGGTGGTTGTTTGAGTAAAAAAGGATCAGAACATGAATACAATGGTTACAGACATGGACATGAACCCTATGTGAACCAATCAAAGAACCCTCCTCCACCTCCACATCATCATCATCATCATCATCATCAACATCAACAACAACAACAACAACAGCAACAACAACAGCAACAACAACAACAACAACAGCGGCAACCTTACAATATACCTGAGAAACCTGCTGCACCTCAAGCCAATTGGAACAAGAACACTGTTCCTGTTCCAAGTCCAAAACCTGTTATCAGGTCAGATACAATTCTTGGGAAGCCATTAGAGGATGTTAGGCAATACTATACCCTTGGAAAAGAATTGGGGAGAGGCCAATTTGGTGTGACATATCTCTGCACTGAGAATTCAAGTGGCCTGCAATATGCTTGTAAATCGATCTCAAAGAGGAAGCTTGTTAGCAAATCTGATAAGGAGGATATAAAAAGGGAGATTCATATTATGCAGCATTTGAGTGGACAAGCAAACATTGTTGAATTCAAAGGTGCTTATGAGGACAAGCATTCAGTTCATGTTGTCATGGAGTTGTGTGCAGGTGGTGAGCTTTTTGATAGGATCATTGCAAAGGGACATTACAGTGAAAGAGCTGCAGCTTCAATATGCAGACAGATTGTGAATGTTGTTCATATTTGCCATTTCATGGGTGTGATGCACAGGGATCTTAAGCCAGAGAATTTCTTGTTGTCCAGTAAGGATGACAAGGCACTTCTCAAGGCCACGGATTTCGGCCTGTCGGTATTCATTGATGAAGGCAAGGTGTATCGTGATATAGTTGGGAGCGCTTATTATGTTGCCCCGGAAGTTCTACGTCGTAGATATGGAAAGGAAATAGATGTATGGAGTGCAGGAGTTATATTATATATCTTACTCAGTGGTGTGCCTCCATTCTGGGCAGAGACGGAAAAGGGAATATTTGATGCCATATTGGAAGGCCATATTGATTTCGAAAGCGCCCCATGGCCGAGCATATCAAATAGTGCTAAGGACCTCGTTCGTAAGATGCTTACACAGGAGCCAAAGAAACGCATCACTTCGGCTCAAGTTCTTGAGCACCCATGGATTAGAGAAGATGGAAATGCTTCTGACAAGCCAATAGACAGTGCAGTCCTTTCCAGAATGAAGCAATTTAGAGCAATGAATAAACTAAAGAAACTTGCACTTAAGGTCATAGCTGAAAATCTTTCTGAAGAAGAGATCCAAGGTTTAAAGTCAATGTTTACAAATATTGACACTGACAATAGCGGTTCAATCACATATGAGGAACTAAGGGCTGGATTGCAACGACTTGGATCGAAACTCACTGAAGCCGAAGTGCGGCAGTTGATGGATGCTGCTGATGTGGATGGAAACGGCACGATCGACTACATAGAATTCATCACTGCTACAATGCATAGACATAGGTTAGAAAGAGATGAGCATCTCTACAAGGCCTTCCAATATTTTGATAAAGACAACAGTGGGTTTATTACAAGAGATGAACTAGAATCAGCCATGAAAGAATATGGTATGGGTGATGAAGCCACAATCAGGGAAATCATATCTGAAGTTGATACAGATAATGATGGAAGAATCAACTATGAAGAATTTT 1633 0.4133 MGGCLSKKGSEHEYNGYRHGHEPYVNQSKNPPPPPHHHHHHHHQHQQQQQQQQQQQQQQQQQQRQPYNIPEKPAAPQANWNKNTVPVPSPKPVIRSDTILGKPLEDVRQYYTLGKELGRGQFGVTYLCTENSSGLQYACKSISKRKLVSKSDKEDIKREIHIMQHLSGQANIVEFKGAYEDKHSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDDKALLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRRYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFESAPWPSISNSAKDLVRKMLTQEPKKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKSMFTNIDTDNSGSITYEELRAGLQRLGSKLTEAEVRQLMDAADVDGNGTIDYIEFITATMHRHRLERDEHLYKAFQYFDKDNSGFITRDELESAMKEYGMGDEATIREIISEVDTDNDGRINYEEF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00290 544 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-LIKE 50 544 - -
Adu07g00290 544 Coils Coil 434 454 - -
Adu07g00290 544 SUPERFAMILY Protein kinase-like (PK-like) 92 390 IPR011009 -
Adu07g00290 544 SUPERFAMILY EF-hand 408 544 IPR011992 -
Adu07g00290 544 Gene3D Phosphorylase Kinase; domain 1 113 196 - -
Adu07g00290 544 ProSitePatterns EF-hand calcium-binding domain. 425 437 IPR018247 -
Adu07g00290 544 Gene3D - 378 544 - -
Adu07g00290 544 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Adu07g00290 544 Coils Coil 42 65 - -
Adu07g00290 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Adu07g00290 544 ProSiteProfiles EF-hand calcium-binding domain profile. 412 447 IPR002048 GO:0005509
Adu07g00290 544 ProSiteProfiles EF-hand calcium-binding domain profile. 448 483 IPR002048 GO:0005509
Adu07g00290 544 ProSitePatterns EF-hand calcium-binding domain. 461 473 IPR018247 -
Adu07g00290 544 ProSiteProfiles Protein kinase domain profile. 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00290 544 PANTHER SERINE/THREONINE-PROTEIN KINASE 50 544 - -
Adu07g00290 544 ProSiteProfiles EF-hand calcium-binding domain profile. 520 544 IPR002048 GO:0005509
Adu07g00290 544 CDD EFh 417 476 IPR002048 GO:0005509
Adu07g00290 544 Pfam EF-hand domain pair 417 477 IPR002048 GO:0005509
Adu07g00290 544 Pfam EF-hand domain pair 487 544 IPR002048 GO:0005509
Adu07g00290 544 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Adu07g00290 544 MobiDBLite consensus disorder prediction 47 68 - -
Adu07g00290 544 CDD STKc_CAMK 111 368 - -
Adu07g00290 544 MobiDBLite consensus disorder prediction 1 96 - -
Adu07g00290 544 Gene3D Transferase(Phosphotransferase) domain 1 197 377 - -
Adu07g00290 544 Pfam Protein kinase domain 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00290 544 ProSiteProfiles EF-hand calcium-binding domain profile. 484 519 IPR002048 GO:0005509
Adu07g00290 544 CDD EFh 491 544 IPR002048 GO:0005509
Adu07g00290 544 SMART efh_1 416 444 IPR002048 GO:0005509
Adu07g00290 544 SMART efh_1 488 516 IPR002048 GO:0005509
Adu07g00290 544 SMART efh_1 523 544 IPR002048 GO:0005509
Adu07g00290 544 SMART efh_1 452 480 IPR002048 GO:0005509
Adu07g00290 544 SMART serkin_6 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00290 544 ProSitePatterns EF-hand calcium-binding domain. 532 544 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00290 Adu-Chr7 2695805 2700212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00290 89 544 EF-hand Containing Proteins AT3G20410 82.895 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Adu07g00290 Pkinase 3.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00290 K13412 - gmx:100794852 868.611