Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00279 ATGATTTCTGGAAGATGTGCTGCTTGCAAGAATCAAAGAAGAAAATGCCCTTCTGATTGCATTTTCTCTCCATATTTTCCTGCCAATGATCCTCAAAAGTTTGCTTGTGTCCACAAAATCTATGGTGGCAGTAATGTTGGAAAAATGCTTCAGGGAATCCCAACCTATCTAAGAGAACAAACTGCAAATGCATTGTATTTAGAAGCAAAATGGAGGATTCATGACCCTGTTTATGGGTCTGTTGGCATTATCTCTTCATTGTATGAACAAATTAAAAATGCAGAAATTGAACTAGCAAAAATTCAAACTCAGATTACTTTCTACAAGCTCCAAACCCAACATGTTGAAGCCGAACCAAATTCGGAGGTTTTGCAATCACAAAGCAGCAATATGGAGCAGTTTGAGTGGGACAATCCAACTATAGCTTCTTGGTTCAATTGA 441 0.3787 MISGRCAACKNQRRKCPSDCIFSPYFPANDPQKFACVHKIYGGSNVGKMLQGIPTYLREQTANALYLEAKWRIHDPVYGSVGIISSLYEQIKNAEIELAKIQTQITFYKLQTQHVEAEPNSEVLQSQSSNMEQFEWDNPTIASWFN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00279 146 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Adu07g00279 146 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 118 - -
Adu07g00279 146 Coils Coil 84 111 - -
Adu07g00279 146 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Adu07g00279 146 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00279 Adu-Chr7 2533211 2534193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00279 1 115 AS2 family AT3G26620 56.410 6.70e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu07g00279 LOB 1.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00279 - - gmx:100790640 200.675