Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00236 ATGCGGGCGGGTCGGAAACCTACCGACGTGGAGGTGGAGCTTATGAGGGAGGCTCGGAGCAAGCTCGCCGAGCTCTGCGTAGGGCTCGCGCCGAAGGATATCGTTGGGAGGGAAGCGATTGGGACGGTGATTGAGGATCTTGGATTGAACGGCAGGGTTAGGGATCAGAGGTTAGGGTTTCGAACTCCAAAGATGTCAATTGCTGAGAGGTATACGCATGCTAAGTGGAAGATGGAAGAAGCAAAGAGGTATGCTGCACCTTCTACAACGTACACATCTCAGCCTGTGCAACCAAGTACCAGTGTAACAGTTGACAACCGTGTGGCTCCACATGGTGTTCGTGTATTTCCACCTGATAATTCAAGCCACATAGCGATCCCTTCTTCGGCAACAACGGTGTCCATTCCTTCTCATGTTTCTGCAGGATCGTCTTCTACGTCGCAATATCAGGCGACTAGCAATGAAGTAAGACCACCTATGGTTTCTGGTGCAATACCTAGCACTCATCTCGGGAGAAATTCATCTCCGATGGTAGTGCCTAAACTTGAAAACCCACAGGTCAGAGCTGATGGAGGATCAAATGGGTCTTCTTATGTGCTTAGTATACCAGCAAATTCTTCAGCAAACCAACCTTTGGCAAATGCTCCACCATGGTCAATACAGACTCAATCTGTGTCGTTAGCTAGAACAGCATTGGAAAACAAGGTGCCTGCTCATAACACTGTCAAGGTACAAGGAACAAGTGATGTAGCTTCTTCAAGGGCAGGTTCACAAATAACAGCAGATCAGAGCTTTAGGCCATTTATTACTCAAACAGCACCTGTAAACTTGTCTACTATGCAACAGTCTTTCCAGGGTATGAACGTTGCTCAGCCTCCTTCAATTCCTACTCATGCTGAAATTGCAAAGATTGTCCAGAAATTGTTACAACCAAAGCTTCCTGAGCATCCGACATGGACTCCTCCATCAAGGGATTATATGAATAAGGCTTTGACATGTCAAGTGTGTGAACTCACTGTCAATGAGGTTGATACTGTGCTACTCTGTGATGCTTGTGAAAAGGGATATCACTTGAAGTGTTTGCAGCCCTCGGTTTTAAGAGGAATTCATAATAGAGTGGATTGGCATTGCATGAGGTGTTTGAATTTAAGCGGTGGAAAGCCTATACCTCCAAAATATGGCCGTGTCATGAGATCATCAAACACACCACCGAAATTGCCCACTACGGTTGGAGTTCAGCAACCTTCTGAGAAGAAAACAGGGAGCTTAGATCCAAAGGTCAGCCAGCAGAATTTAACAACAAATGGGAGCACTGCTCCAATAGTTGCTACCAGCAATGTCAAAGTTGAGCCACCATCTGATTCAAAGACTCCTGGTACAAAGGATATACATGGTACCGGATCATCCAACATGGAACATATTGATCAGAAACCTGACCCAAACATCTCTATGAAATCCCTTAATGCAGCTTCTGTTCCTTCCATTGACTTTCCTGGTGAAAGTTCTGCTCAACAAATTAATCCTGAGCCTTCAACCTGTAAAGAGAGTTCAACCTCTAAAGAGTGTTTCGATTCCAAGACCCTTCCTAAATTATCTGAGCCAGGTGAATGTGACAATTTGCAATCATCACAAGACTTTCAAGCTGAGCAGAAAGTGTCACAGGGCAATGCTGTAGTATTATCGGATAAAAAAGTTGACAGTAGTTTAATGAGTAATGAACAAAAGGAATCACAATCAGGAGAAAGCTCAACTTATGATACCAAGCGAGATGGCCAAGATGTTGCACTAGCAAACTTTGATGGGAGTTCTGGAACTAATGCTGAAGTTAGACAACACTGTGCGTTATCTTCAGATAGCTCGCAAGTTGTAGAATGGATTGGTGATGTTATACACATTGTTGATGAGAAAAAGTTTTACAAATCTTGCTGTGTTGATGGAGTGACATATAGGCTTCATAGTCATGCTCTTCTCCCATCTGGCCATGGCAAATTAGCACCTTCTAAACTTCAGTCTATGTGGGAAGACTGCAAAACTGGGTTAAAGTGGGTTAAGGTGACGAAATGCTACTTTCCTGGTGATTTGCCTGGGAACATTGGTCATCCGTGTATATCCGAAGTTAATGAGGTTTATGAATCTAATAGTGAAAGAACTGAAAAGGCTAGCTCTATTCGAGGTCCATGTGAAGTCCTTCCATCTGATAAATTTAATCAAGAAAACGACAGACGAAATCAGTTGGGAATTGAGGCAAATGCTAGGCATGAACATTTCATGCAATTTTATGGTGAGATGCATGTTAGACCCGCTATTCGATGTAACATGCGACGCGCCTGA 2331 0.4393 MRAGRKPTDVEVELMREARSKLAELCVGLAPKDIVGREAIGTVIEDLGLNGRVRDQRLGFRTPKMSIAERYTHAKWKMEEAKRYAAPSTTYTSQPVQPSTSVTVDNRVAPHGVRVFPPDNSSHIAIPSSATTVSIPSHVSAGSSSTSQYQATSNEVRPPMVSGAIPSTHLGRNSSPMVVPKLENPQVRADGGSNGSSYVLSIPANSSANQPLANAPPWSIQTQSVSLARTALENKVPAHNTVKVQGTSDVASSRAGSQITADQSFRPFITQTAPVNLSTMQQSFQGMNVAQPPSIPTHAEIAKIVQKLLQPKLPEHPTWTPPSRDYMNKALTCQVCELTVNEVDTVLLCDACEKGYHLKCLQPSVLRGIHNRVDWHCMRCLNLSGGKPIPPKYGRVMRSSNTPPKLPTTVGVQQPSEKKTGSLDPKVSQQNLTTNGSTAPIVATSNVKVEPPSDSKTPGTKDIHGTGSSNMEHIDQKPDPNISMKSLNAASVPSIDFPGESSAQQINPEPSTCKESSTSKECFDSKTLPKLSEPGECDNLQSSQDFQAEQKVSQGNAVVLSDKKVDSSLMSNEQKESQSGESSTYDTKRDGQDVALANFDGSSGTNAEVRQHCALSSDSSQVVEWIGDVIHIVDEKKFYKSCCVDGVTYRLHSHALLPSGHGKLAPSKLQSMWEDCKTGLKWVKVTKCYFPGDLPGNIGHPCISEVNEVYESNSERTEKASSIRGPCEVLPSDKFNQENDRRNQLGIEANARHEHFMQFYGEMHVRPAIRCNMRRA 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00236 776 MobiDBLite consensus disorder prediction 563 589 - -
Adu07g00236 776 Gene3D - 267 383 - -
Adu07g00236 776 MobiDBLite consensus disorder prediction 563 581 - -
Adu07g00236 776 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 753 - -
Adu07g00236 776 ProSiteProfiles Zinc finger PHD-type profile. 330 383 IPR019787 -
Adu07g00236 776 MobiDBLite consensus disorder prediction 396 527 - -
Adu07g00236 776 MobiDBLite consensus disorder prediction 401 525 - -
Adu07g00236 776 SMART PHD_3 332 381 IPR001965 -
Adu07g00236 776 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 753 - -
Adu07g00236 776 ProSitePatterns Zinc finger PHD-type signature. 333 380 IPR019786 -
Adu07g00236 776 Gene3D - 616 767 IPR043151 -
Adu07g00236 776 Pfam PHD-finger 333 381 IPR019787 -
Adu07g00236 776 SUPERFAMILY FYVE/PHD zinc finger 323 388 IPR011011 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Adu07g00236 PHD 8.9e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00236 - - aip:107609239 1495.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00236 07 2212507 2216644 Adu07g00236 07 2212507 2216644 ECH