Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00219 ATGAGGGATCGGACAACGGGTCGTGCTCGTGGATTCGGCTTTATTGTCTTTGCTGATCTTGCTGTTGCAGAAAGAGTAATTATGGATAAACATGTAATCGATGGCCGCACGGTTGAAGCAAAGAAGGCTGTTCCCAGAGATGATCAGCAAGCTATAAATAGGCAGTCTGCTAGCATACAGGGATCTCCTAGTCCTGGTCGCACGAAGAAAATCTTCGTTGGAGGTTTACCATCAACGATCACGGAAAGTGATTTCAAGAAGTATTTTGATCAGTTCGGTACAATTACTGATGTTGTAGTGATGTATGATCACAATACTCAGAGGCCAAGAGGATTTGGCTTCATCACTTATGATTCGGAAGAAGCTGTGGACAGAGTTCTTTATAAAACATTTCATGAACTCAATGGGAAGTTGGTTGAGGTCAAGAGGGCAGTTCCCAAAGATCTTTCTCCTGGACCCAATCGGAGCCCATTGATAGGATATAACTATGGTTTGAATAGGACAAGTAGCTACCTAAACAGTTATGCTCAGGGTTTTAATATTAATCCGATAGGAGGCTATGGCGTAAGGATGGATGGTAGATTTAGTCCACTTTCTAGTGGTAGAAGCAGTTTTACCCCATTTGGATCTAGTGGTTATGGAATGGGAGTGAATTTGGAATCAGCATTGAGTCCAACCTATGGAGGAACTTCCAATTATGGGGGAAATATAGGGTACGGTCGAATATTTAGTCCTTTCTATAGTGGCAATTCAAGCAGGTACACTACTCCTATTGGCTTTAGTGGGGGCAATGCAAGAAGCGACACTCTTACGAACTCAACTTCTAGGAATGTCTGGGGAAATGGTGGCCTGAATACTACGACTAATAACCCCGTCAGCCCTGGTGCGTACTTGGGATCAGGAAGTGGGGCTTTCGGTGTTTCAATTGGAAATAGTGGTACCAATTGGGGTCCATCAGTTCCAACGCAGGGTGGAGGGGCTGCTTCCGGCTATGCTACTTGGAGCAATGTTTATGCCGGTGGAGATAGTAGCATAGGATTAGGAGGAGGAGGAGGGTATGGAAGGAACAGTGGCACAAATGCGACCCAGTCCTCTACATTTGCTGCACCAAACAGTGTTTATGATGGACCCTATGGGGAGTTATACCGCAGTGGTTCTGCTTACAATGACTCTACTTGGCGGTCCGCTGCTTCTGAGGTAGATGGTTCTGGTGCATTTGGTTATGGACTTGGTGGCATTGTTTCAGATGATCCAGTGAAGAGTTCTGAGGGTTTTATTGGGAACTACAATGTAACAAGTAGACAATCTAATAGAGGAATTGCTGCTTAG 1329 0.4492 MRDRTTGRARGFGFIVFADLAVAERVIMDKHVIDGRTVEAKKAVPRDDQQAINRQSASIQGSPSPGRTKKIFVGGLPSTITESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKLVEVKRAVPKDLSPGPNRSPLIGYNYGLNRTSSYLNSYAQGFNINPIGGYGVRMDGRFSPLSSGRSSFTPFGSSGYGMGVNLESALSPTYGGTSNYGGNIGYGRIFSPFYSGNSSRYTTPIGFSGGNARSDTLTNSTSRNVWGNGGLNTTTNNPVSPGAYLGSGSGAFGVSIGNSGTNWGPSVPTQGGGAASGYATWSNVYAGGDSSIGLGGGGGYGRNSGTNATQSSTFAAPNSVYDGPYGELYRSGSAYNDSTWRSAASEVDGSGAFGYGLGGIVSDDPVKSSEGFIGNYNVTSRQSNRGIAA 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00219 442 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 442 - -
Adu07g00219 442 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 71 130 IPR000504 GO:0003723
Adu07g00219 442 Gene3D - 49 157 IPR012677 -
Adu07g00219 442 SUPERFAMILY RNA-binding domain, RBD 1 66 IPR035979 GO:0003676
Adu07g00219 442 MobiDBLite consensus disorder prediction 44 68 - -
Adu07g00219 442 SMART rrm1_1 70 142 IPR000504 GO:0003723
Adu07g00219 442 PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 1 442 - -
Adu07g00219 442 CDD RRM2_DAZAP1 67 146 IPR034131 GO:0003723
Adu07g00219 442 SUPERFAMILY RNA-binding domain, RBD 68 179 IPR035979 GO:0003676
Adu07g00219 442 MobiDBLite consensus disorder prediction 49 65 - -
Adu07g00219 442 Gene3D - 1 48 IPR012677 -
Adu07g00219 442 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 69 146 IPR000504 GO:0003723
Adu07g00219 442 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 45 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00219 Adu-Chr7 2118487 2120844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00219 5 122 Eukaryotic Initiation Factors Gene Family AT1G22760 33.065 6.81e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00219 K14411 - gmx:100788515 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00219 07 2118487 2120844 Adu07g00219 07 2118487 2120844 ECH
Adu01g00247 01 3176875 3181391 Adu07g00219 07 2118487 2120844 PCT