Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00177 ATGGTTTCTTCTCTCTCTGCGGCACTACTTCCTCCTCTTTCTCTCTCTACCTCTTCCTCCTCGCTCTCTTCCAACCCAAAGTTTGCGTCTTTGTGCTTTCAATCTGGTAACACCTTCAAGCTCAGAACCCCTAAGCTGCTTCACTCATCAACTAGGGTTTTTGCTGCGCCTGAAGTTTTGGATTCTGAGGAACCGCTAGACGTACCTCCAGAAATCCTTGGCGATGATGAATCTGAGGCGACCACCTTTCAGGTTGGAGATTCAGACACTCGTACCACTTCCTCAATTAGCATTGGTGGTGATCCAGATACGATGGCGCCTAAGCAGAAGATTAGAATCAAACTTAGGTCTTACTGGGTGCCCTTGATAGAGGATTCTTGCAAGCAGATACTAGATGCAGCAAGGAATACCAATGCAAAAACCATGGGTCCTGTACCATTGCCAACTAAGAAGAGAATTTATTGTGTTCTTAAATCGCCACATGTACATAAGGATGCTCGATTCCATTTTGAGATCAGAACACATCAGCGTCTCATTGATATTTTAGGTCAAGCTCTGAGCTATCGACATTTTACGGCTCTTAATCCATATTGCAACCGAGATTGGATTATGTTACTGAGAAAACTATATGGGGGATGA 639 0.4429 MVSSLSAALLPPLSLSTSSSSLSSNPKFASLCFQSGNTFKLRTPKLLHSSTRVFAAPEVLDSEEPLDVPPEILGDDESEATTFQVGDSDTRTTSSISIGGDPDTMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILGQALSYRHFTALNPYCNRDWIMLLRKLYGG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00177 212 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 2 182 IPR001848 GO:0003735|GO:0005840|GO:0006412
Adu07g00177 212 PRINTS Ribosomal protein S10 family signature 110 123 IPR001848 GO:0003735|GO:0005840|GO:0006412
Adu07g00177 212 PRINTS Ribosomal protein S10 family signature 145 160 IPR001848 GO:0003735|GO:0005840|GO:0006412
Adu07g00177 212 PRINTS Ribosomal protein S10 family signature 166 180 IPR001848 GO:0003735|GO:0005840|GO:0006412
Adu07g00177 212 SMART Ribosomal_S10_2 112 199 IPR027486 -
Adu07g00177 212 MobiDBLite consensus disorder prediction 81 100 - -
Adu07g00177 212 ProSitePatterns Ribosomal protein S10 signature. 134 149 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Adu07g00177 212 PANTHER BNAC05G40270D PROTEIN 2 182 - -
Adu07g00177 212 MobiDBLite consensus disorder prediction 81 102 - -
Adu07g00177 212 Gene3D Ribosomal protein S10 domain 101 196 IPR036838 -
Adu07g00177 212 Hamap 30S ribosomal protein S10 [rpsJ]. 108 209 IPR001848 GO:0003735|GO:0005840|GO:0006412
Adu07g00177 212 Pfam Ribosomal protein S10p/S20e 112 182 IPR027486 -
Adu07g00177 212 SUPERFAMILY Ribosomal protein S10 110 183 IPR036838 -
Adu07g00177 212 TIGRFAM rpsJ_bact: ribosomal protein uS10 109 182 IPR001848 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00177 Adu-Chr7 1595076 1596809 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00177 109 194 Cytoplasmic Ribosomal Protein Gene Family AT5G62300 29.885 2.35e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00177 K02946 - gmx:100526953 256.144