Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00172 ATGGCGAAGACAGAAGCAACAGAGCCCTTGCTATCAGGATCAGAGGATCTTGAAGCTCAAAAGTTCAGAAGGCAGTTAAAGAAGAGAAGGTTCCGCCGTGCTAGAAGTGCACCTTGCAACGATGTTGATCCCCAGGACACCAATGGCAATATACCAATTCCAAGATCTGATTCAATATTTGGGAACATACATCCAAGCTTCAGAAAAGTTGCTATATACCTTGTAGTGTATATAGGAGTAGGTGCTATTGTATTCTACCTTGTTGGGAACCAGATCAAGGGGCTGAAAACAGATGGGGTTCTTGATGCTGTATACTTCACAATTGTAACAATGACCACAGTTGGTTATGGAGATATTGTTCCGAATAGCAACCTTACAAAGCTACTTGCATGCGCTTTTGTTTTCACCGGAATGGCATTGGTTGGACTAATCCTAGGCAAAGCAGCAGATTACTTGGTTGAGAAGCAAGAATTCTTGCTAGTTAAAGCTTTGCACATGCACCAAAATGTTGGTCAAAGAGAAATTCTAAAGGAGGTTGAGGTGAACAAAACAAGATACAAATTCCTTTTGGCCTTTTTCCTTCTCTTGATTATGATCATAGCAGGGACAGTTTTCTTGATCATGGTTGAGAAATTGGAATTCGTCGATGCGTTTTACTGCGTTTGTTCTACTCTTACAACCCTGGGATATGGTGATAAGAGTTTCTCAACTGAAGCAGGAAGAATATTTGCTGTGTTTTGGATATTGGCAGGTACAATTTCTTTGGCTCAGGTGTTCCTCTACATTGCTGAGCTTAACACTGAAAGCCGACAAAAGAAAATTGTGAAGTGGGTTCTTTCGAAGAAGATGACCAATTTGGACTTGGAGGCAGCAGATATTGATGATGACGGCACTGTTGGGGCTGCTGAATTCGTTGTTTATAAACTCAAAGAGATGGGGAAGATTAGTCAAGAAGATATATCACTTTTGATGCAGGAGTTTGAAGAACTTGATGTTGATCAATCTGGTACCCTTTCAATTTCTGATTTAGCACTTGCTCAGTCATCCTAG 1050 0.4086 MAKTEATEPLLSGSEDLEAQKFRRQLKKRRFRRARSAPCNDVDPQDTNGNIPIPRSDSIFGNIHPSFRKVAIYLVVYIGVGAIVFYLVGNQIKGLKTDGVLDAVYFTIVTMTTVGYGDIVPNSNLTKLLACAFVFTGMALVGLILGKAADYLVEKQEFLLVKALHMHQNVGQREILKEVEVNKTRYKFLLAFFLLLIMIIAGTVFLIMVEKLEFVDAFYCVCSTLTTLGYGDKSFSTEAGRIFAVFWILAGTISLAQVFLYIAELNTESRQKKIVKWVLSKKMTNLDLEAADIDDDGTVGAAEFVVYKLKEMGKISQEDISLLMQEFEELDVDQSGTLSISDLALAQSS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00172 349 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Adu07g00172 349 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
Adu07g00172 349 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 18 341 - -
Adu07g00172 349 SUPERFAMILY Voltage-gated potassium channels 62 167 - -
Adu07g00172 349 MobiDBLite consensus disorder prediction 29 48 - -
Adu07g00172 349 Gene3D - 254 348 - -
Adu07g00172 349 Gene3D - 192 253 - -
Adu07g00172 349 SUPERFAMILY Voltage-gated potassium channels 181 281 - -
Adu07g00172 349 Pfam Ion channel 72 153 IPR013099 -
Adu07g00172 349 Pfam Ion channel 194 265 IPR013099 -
Adu07g00172 349 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 18 341 IPR003280 GO:0005267|GO:0016020|GO:0071805
Adu07g00172 349 SUPERFAMILY EF-hand 251 345 IPR011992 -
Adu07g00172 349 Gene3D - 64 158 - -
Adu07g00172 349 PRINTS Two pore domain K+ channel signature 223 251 IPR003280 GO:0005267|GO:0016020|GO:0071805
Adu07g00172 349 PRINTS Two pore domain K+ channel signature 297 306 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00172 Adu-Chr7 1563590 1564989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00172 52 349 Ion Channels AT5G55630 61.409 2.59e-141 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00172 K05389 - gmx:100777388 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00172 07 1563590 1564989 Adu07g00172 07 1563590 1564989 ECH