Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00162 ATGGAGAAGGTGGCCGCCGCCGCTCTAGGCTTTGGTGGAGAGGAGGAGTTGGCGCTGTGGTTTCTGGACTCAGCGGAAGTGAGAAGAGGGGAAGAAGAAGAGAAAGGGGCGCGGCGGTGTGGGTTGTCGCCGGAGGTTGTGGTGAAGGGAGGTGGCCGTGGCGGTGCTGAGGTGATGGTGATGGAGGTTATGGAGGTTATGGTGATGGTAATGGTGAAGAAGATGAAGATGATGATGGTGAATGGTTGGCTCAGATTTGGGGGGAGATTGGGAGTGCCACGTAGGTTCGGAAACCCACGAACGAAGCTCAGATCCAAGCCAGGGCACTTTTGTCACACGGACAGCATCTATCATGGGTACAAGATTAGTTTCGAGCTTTCATGCTGCGTTTGTGAGTTCATAGGAATAGTTACCTACGAAGCAAATGGGCATTGTGACACCGAGCAACGTAGGGCTCTTGCTGCTGAGGACATGATATGGGCCATGTCGAGCCTTGGTTTCGACAACTACGCCGAGCTTCTCAAGGCTCATCTTAGCCATGTGCGCTATATTGGCGCTGAGGCACACTACACTGATGCTCCTCAACGCCGTGACAAGAATGTTGCTCCACCACCAACCCCTACACGTGTGGGGGTGTTGGTGGACTTATCCACCAACATCCTTTGCGTGTAG 672 0.5372 MEKVAAAALGFGGEEELALWFLDSAEVRRGEEEEKGARRCGLSPEVVVKGGGRGGAEVMVMEVMEVMVMVMVKKMKMMMVNGWLRFGGRLGVPRRFGNPRTKLRSKPGHFCHTDSIYHGYKISFELSCCVCEFIGIVTYEANGHCDTEQRRALAAEDMIWAMSSLGFDNYAELLKAHLSHVRYIGAEAHYTDAPQRRDKNVAPPPTPTRVGVLVDLSTNILCV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00162 223 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 126 162 IPR003958 -
Adu07g00162 223 PRINTS CCAAT-binding transcription factor subunit A signature 164 182 - -
Adu07g00162 223 PRINTS CCAAT-binding transcription factor subunit A signature 126 144 - -
Adu07g00162 223 PRINTS CCAAT-binding transcription factor subunit A signature 145 163 - -
Adu07g00162 223 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9 129 190 - -
Adu07g00162 223 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 129 190 IPR027113 GO:0001228|GO:0006355|GO:0016602
Adu07g00162 223 Gene3D Histone, subunit A 123 203 IPR009072 GO:0046982
Adu07g00162 223 SUPERFAMILY Histone-fold 125 183 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00162 Adu-Chr7 1486499 1488770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00162 129 184 CCAAT-HAP3 Transcription Factor Family AT1G21970 51.786 3.41e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00162 K08065 - egr:104428596 68.1662