LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu07g00160	ATGCACTCCACCATTCTAATAATCTTCTTCTTCTTTTTCTTCTTGTTAACCTCAACCTCATTGATTGTTTCGGCAGAGAACGTCAGTTTCGAATTCTCTTCTTTCACACTCCGAAACATAACCCTCGTCGGAGATTCCTACCTCAGGAACGGACTCGTCGGACTTACACGCGCCACCGACGTCCCCACCACCTCCTCCGGCGCTCTCCTCTACGACCACCCTATCCCTCTCTTCGACCCACCCACCAACACCACCTCCTCCTTCTCCACTACCTTCTCATTCTCCATCACCAACCTCAACCCTTCCTCCTTCGGCGACGGCATCGCCTTCTTCCTCTCCCCTTCCAACACCACCGCTTCCGCCACCGTCTCCCCCGCCGGTCGCCTAGGTCTTCCTACCTCCACGCGCTTCCTCGCCGTCGAATTCGACACGCGCGATGATTCCGCCTTCCACGACCCTAACCAGAACCACGTCGGCTTCAACTTCAACTCTTTGAACTCCATAGCCACCGTTGACCCTATAACCCACGGCATTGACCTTAAATCCGGCAACACAATAACCTCTTGGATCGACTACAGCACTGAAAAAGAAACCTTAACGGTTTTCTTGAGCTATTCTTCTTCTTCCAAACCCTCCAGCCCTGTTCTCACAGTGCGCAACGTCGATCTCTCCAAGCTCTTGAAAGAAGAAAGGGTTTACGTTGGATTCTCAGGATCCACCAGTGGAAGCACCGAGGTTCACTTGATCGAGCGTTGGAGCTTCAAGAGCTTCGGTTTCGTCCCTAAAAGACAGAACTTGAACCCTCACAATGTTTCTGATAACACCGTTGGAGTAACGGGAAATGGTGCCACTGTTAATTTTCCACCTGCTACAACTTCTTCTTCTAATGACGGTATAGGTGATGATGATGATGATGATGACGACGATGATGTTGATGGAGATAGAAAGAACAAGAACAAGAGGAGGAGAATTGGTATTGCTGTTGCGGTTGCGGGTCCTGCATTTTTCTTTGTTCTGTTCTCGATTTTGGTGTTCTTTGCGGTTCGAAAATGGAAGGGTATAAAGAGAGCTGGTAACAACAATAATTCTAAGAGCAACAGTGTGACAAGTTTTAAGGCTGAATCATTTGTTACGTGTCCAAGGCAATTTGATTACAAGGATCTGAAGACTGCAACGAGAGAGTTTCATCCAAGCAGAATCATTGGTCATGGCTCTTTTGGGACTGTATACAAAGCTTTCTTTGTGTCTTCTGGTACCATTGCTGCTGTAAAGAGATCAAGGCATTCTCATGAAGGGAAAACTGAGTTCCTTGCTGAGTTGTCAATCATTGCTGGTTTGAGGCACAAGAACTTGGTTCAGCTCCAAGGTTGGTGTGTTGAGAAAGGTGAGTTgcttcttgtgtatgatttcatgcctaatgggagcttggacaagatgctatacaaggaacctgagaggggaaggttgttgaattggtctcatagggtgaacattgctgttggtttggcttctgttcttgtttaccttcaccaagaatgtgaacaaagggtgattcatagggatatcaaaactggcaacattttgcttgatgggaatttcaatccaaggttgggtgattttggtttggcaaagcttatggatcatgacaagagtcctgtttctactttgactgctggaacaatggggtaccttgcacctgagtatcttcaaTATGGTAAAGCGACCGATAAGACTGATGTGTTTAGCTATGGAGTGGTGATTCTTGAGGTGGCTTGTGGGAAGAGGCCAATTGAAAGGGAAGGGCAAAAGATGATGAATTTGGTGGACTGGGTTTGGGGGTTGCATTCTGAAGGGAAGGTTATTGATGCTGCAGATAAGAGGCTTAATGGTGAGTTTGTTGAGGAAGAGATGAGGAAGCTTTTGCTTTTGGGGTTGTGTTGTGCTAACCCAGATAGTGCTGAGAGGCCTTCAATGAGGAAGGTGCTTCAGATTCTCAACAATGAAGCTGCACCAATTAGTGTTCCTAAAGTGAAGCCAAGTTTAACTTTCTCTTCTGATTTGCCATGCACAATTGATGACATTGTTTCTGATACTGAAGAGTTCAACACCAGCCAGAGCATGTGTGAGATTAAGATTGATTCATCATCAAGTTGCTGA	2157	0.3982	MHSTILIIFFFFFFLLTSTSLIVSAENVSFEFSSFTLRNITLVGDSYLRNGLVGLTRATDVPTTSSGALLYDHPIPLFDPPTNTTSSFSTTFSFSITNLNPSSFGDGIAFFLSPSNTTASATVSPAGRLGLPTSTRFLAVEFDTRDDSAFHDPNQNHVGFNFNSLNSIATVDPITHGIDLKSGNTITSWIDYSTEKETLTVFLSYSSSSKPSSPVLTVRNVDLSKLLKEERVYVGFSGSTSGSTEVHLIERWSFKSFGFVPKRQNLNPHNVSDNTVGVTGNGATVNFPPATTSSSNDGIGDDDDDDDDDDVDGDRKNKNKRRRIGIAVAVAGPAFFFVLFSILVFFAVRKWKGIKRAGNNNNSKSNSVTSFKAESFVTCPRQFDYKDLKTATREFHPSRIIGHGSFGTVYKAFFVSSGTIAAVKRSRHSHEGKTEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGRLLNWSHRVNIAVGLASVLVYLHQECEQRVIHRDIKTGNILLDGNFNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSYGVVILEVACGKRPIEREGQKMMNLVDWVWGLHSEGKVIDAADKRLNGEFVEEEMRKLLLLGLCCANPDSAERPSMRKVLQILNNEAAPISVPKVKPSLTFSSDLPCTIDDIVSDTEEFNTSQSMCEIKIDSSSSC	718

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu07g00160	718	MobiDBLite	consensus disorder prediction	268	318	-	-
	Adu07g00160	718	ProSitePatterns	Legume lectins beta-chain signature.	138	144	IPR019825	-
	Adu07g00160	718	Pfam	Protein kinase domain	396	663	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu07g00160	718	CDD	lectin_legume_LecRK_Arcelin_ConA	28	258	IPR001220	GO:0030246
	Adu07g00160	718	Gene3D	Phosphorylase Kinase; domain 1	354	470	-	-
	Adu07g00160	718	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1	21	685	-	-
	Adu07g00160	718	ProSiteProfiles	Protein kinase domain profile.	395	670	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu07g00160	718	CDD	STKc_IRAK	401	667	-	-
	Adu07g00160	718	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	517	529	IPR008271	GO:0004672\|GO:0006468
	Adu07g00160	718	PANTHER	-	21	685	-	-
	Adu07g00160	718	Gene3D	-	25	282	-	-
	Adu07g00160	718	SMART	serkin_6	395	670	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu07g00160	718	Gene3D	Transferase(Phosphotransferase) domain 1	471	675	-	-
	Adu07g00160	718	Pfam	Legume lectin domain	28	261	IPR001220	GO:0030246
	Adu07g00160	718	SUPERFAMILY	Concanavalin A-like lectins/glucanases	26	262	IPR013320	-
	Adu07g00160	718	SUPERFAMILY	Protein kinase-like (PK-like)	377	690	IPR011009	-
	Adu07g00160	718	MobiDBLite	consensus disorder prediction	268	297	-	-
	Adu07g00160	718	ProSitePatterns	Protein kinases ATP-binding region signature.	401	424	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu07g00160	Adu-Chr7	1479813	1482551	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu07g00160	5	700	Receptor kinase-like Gene Family	AT5G55830	57.983	0.0	780

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Adu07g00160		Pkinase	2.6e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu07g00160	-		-	adu:107496163	1318.91