Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00127 ATGGATTGCCTAGAGCAAAGAAAGGCCAGCATGGAGCAACCAACAACTTCAGAAGATGATTTGTATAAACAACCTTTCGTTATAGGTGTTGCTGGTGGGGCAGCATCTGGCAAGACTGCCGTTTGTGATATGATTATTCAGCAGCTTCATGATCAACGAGTTGTACTTGTTAATCAGGATTCATTTTACCATAATTTGACTGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGACCATCCTGAAGCTTTTGATACCGAGCAGTTGCTAAGTGTCATGGACAAGTTAAAGCGTGGTCAAGCAGTAAATATTCCAAAGTATGACTTTAAGGGTTACAAAAGCGGTGTGTCTCCGGCGAGAAGGGTAAACCCTGCAGATGTTATAATTTTGGAAGGGATCCTTATTTTCCATGATCCACGTGTTCGGGCATTGATGAATATGAAGATATTTGTTGATACAGATGCTGATGTTCGGCTCGCAAGAAGAATTAGGCGTGATACTGCCGAGAAGGCTCGTGATATTGCAACAGTGCTTGATCAGTATTCTAAATTTGTGAAGCCGGCTTTCGATGACTTTATCCTTCCAACAAAGAAGTATGCTGATATAATCATACCCCGAGGAGGAGATAATCATGTGGCCATCGATTTGATTGTACAGCATATTCGAACAAAACTTGGTCAGCATGATCTGTGTAAAATATATCCTAATTTATACGTCATTCAGTCAACTTTTCAGATGCGGGGTATGCATACCCTCGTACGTGATGCTAAGACAACAAAGCATGATTTTGTATTCTATTCTGACCGTTTGATCCGTTTGGTTGTAGAACATGGCCTAGGGCATCTGCCATTTACAGAAAAACAAGTAATCACTCCTACTGGGTCTGTATACAGTGGTGTGGATTTTTGTAAGAGGTTGTGCGGCGTCTCCATCATCAGGAGTGGGGAGAGTATGGAGAATGCTTTACGCGCATGCTGCAAAGGTATCAAGATTGGGAAGATTCTAATTCATAGAGAAGGAGACAACGGTCAACAGCTAATATATGAAAAGTTGCCGAATGATATCTCAGATAGGCATGTGTTACTCTTGGATCCTATCTTGGGCACAGGTAATTCAGCTGTTCAAGCGATTTCTTTACTATTAAGAAAGGGCGTACCAGAGTCCAATATTATATTTCTCAATCTCATATCAGCACCTCAAGGTGTTCATGTGGTCTGCAAAAGCTTTCCAAGAATAAAAATCGTGACGTCTGAGATTGACATTGGTTTGAATGAAGATTTCCGCGTTATACCTGGCATGGGAGAGTTTGGGGATAGGTATTTTGGAACAGATGATGATGACATGCAAGTTGTGGCCCCTTCTTAA 1368 0.413 MDCLEQRKASMEQPTTSEDDLYKQPFVIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELTRVQDYNFDHPEAFDTEQLLSVMDKLKRGQAVNIPKYDFKGYKSGVSPARRVNPADVIILEGILIFHDPRVRALMNMKIFVDTDADVRLARRIRRDTAEKARDIATVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQMRGMHTLVRDAKTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLRKGVPESNIIFLNLISAPQGVHVVCKSFPRIKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDDMQVVAPS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00127 455 CDD UMPK 27 225 IPR000764 -
Adu07g00127 455 TIGRFAM udk: uridine kinase 24 225 IPR000764 -
Adu07g00127 455 Gene3D - 229 444 IPR029057 -
Adu07g00127 455 CDD PRTases_typeI 302 417 IPR000836 -
Adu07g00127 455 PANTHER URIDINE KINASE 2 446 - -
Adu07g00127 455 Pfam Phosphoribulokinase / Uridine kinase family 27 213 IPR006083 GO:0005524|GO:0016301
Adu07g00127 455 PANTHER URIDINE KINASE 2 446 - -
Adu07g00127 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 218 IPR027417 -
Adu07g00127 455 Gene3D - 22 228 IPR027417 -
Adu07g00127 455 PRINTS Uridine kinase signature 25 42 - -
Adu07g00127 455 PRINTS Uridine kinase signature 55 66 - -
Adu07g00127 455 PRINTS Uridine kinase signature 193 206 - -
Adu07g00127 455 PRINTS Uridine kinase signature 157 167 - -
Adu07g00127 455 PRINTS Uridine kinase signature 171 182 - -
Adu07g00127 455 PRINTS Uridine kinase signature 100 115 - -
Adu07g00127 455 Pfam Uracil phosphoribosyltransferase 243 444 - -
Adu07g00127 455 SUPERFAMILY PRTase-like 228 445 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00127 Adu-Chr7 1158070 1162095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00127 9 447 PRT Gene Family AT4G26510 86.560 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00127 K00876 - gmx:100798205 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00127 07 1158070 1162095 Adu07g00127 07 1158070 1162095 ECH
Adu01g00324 01 4130592 4135170 Adu07g00127 07 1158070 1162095 PCT